Tackled infinite loop by changing float64Array
generator to
`float32Array` generator; gave up on avoiding `any` type in `Jstat_test.ts`
This commit is contained in:
parent
0ab1858c0e
commit
36f929b726
2
.github/dependabot.yml
vendored
2
.github/dependabot.yml
vendored
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@ -9,3 +9,5 @@ updates:
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directory: "/" # Location of package manifests
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directory: "/" # Location of package manifests
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schedule:
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schedule:
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interval: "daily"
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interval: "daily"
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commit-message:
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prefix: "⬆️"
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@ -4,7 +4,7 @@ import {
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resultMap,
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resultMap,
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squiggleExpression,
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squiggleExpression,
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errorValueToString,
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errorValueToString,
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} from "../src/js/index";
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} from "../../src/js/index";
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let testRun = (x: string): squiggleExpression => {
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let testRun = (x: string): squiggleExpression => {
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let result = run(x, { sampleCount: 100, xyPointLength: 100 });
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let result = run(x, { sampleCount: 100, xyPointLength: 100 });
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58
packages/squiggle-lang/__tests__/TS/Jstat_test.ts
Normal file
58
packages/squiggle-lang/__tests__/TS/Jstat_test.ts
Normal file
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@ -0,0 +1,58 @@
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import {
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run,
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Distribution,
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squiggleExpression,
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errorValueToString,
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errorValue,
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result,
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} from "../../src/js/index";
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import * as fc from "fast-check";
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let testRun = (x: string): any => {
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//result<squiggleExpression, errorValue> => {
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return run(x, { sampleCount: 1000, xyPointLength: 100 });
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};
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let failDefault = () => expect("codepath should never").toBe("be reached");
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describe("Jstat: cumulative density function", () => {
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test("of a normal distribution at 3 stdevs to the right of the mean is within epsilon of 1", () => {
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fc.assert(
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fc.property(fc.float(), fc.float({ min: 1e-7 }), (mean, stdev) => {
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let squiggleString = `cdf(normal(${mean}, ${stdev}), ${
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mean + 3 * stdev
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})`;
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let squiggleResult = testRun(squiggleString);
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let epsilon = 5e-3;
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switch (squiggleResult.tag) {
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case "Error":
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expect(errorValueToString(squiggleResult.value)).toEqual(
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"<Test cases don't seem to be finding this>"
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);
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case "Ok":
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expect(squiggleResult.value.value).toBeGreaterThan(1 - epsilon);
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}
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})
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);
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});
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test("of a normal distribution at 3 stdevs to the left of the mean is within epsilon of 0", () => {
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fc.assert(
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fc.property(fc.float(), fc.float({ min: 1e-7 }), (mean, stdev) => {
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let squiggleString = `cdf(normal(${mean}, ${stdev}), ${
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mean - 3 * stdev
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})`;
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let squiggleResult = testRun(squiggleString);
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let epsilon = 5e-3;
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switch (squiggleResult.tag) {
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case "Error":
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expect(errorValueToString(squiggleResult.value)).toEqual(
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"<Test cases don't seem to be finding this>"
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);
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case "Ok":
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expect(squiggleResult.value.value).toBeLessThan(epsilon);
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}
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})
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);
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});
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});
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58
packages/squiggle-lang/__tests__/TS/Parser_test.ts
Normal file
58
packages/squiggle-lang/__tests__/TS/Parser_test.ts
Normal file
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@ -0,0 +1,58 @@
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import {
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run,
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squiggleExpression,
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errorValue,
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result,
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} from "../../src/js/index";
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import * as fc from "fast-check";
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let testRun = (x: string): result<squiggleExpression, errorValue> => {
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return run(x, { sampleCount: 1000, xyPointLength: 100 });
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};
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describe("Squiggle is whitespace insensitive", () => {
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test("when assigning a distribution to a name and calling that name", () => {
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/*
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* intersperse varying amounts of whitespace in a squiggle string
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*/
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let squiggleString = (
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a: string,
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b: string,
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c: string,
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d: string,
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e: string,
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f: string,
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g: string,
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h: string
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): string => {
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return `theDist${a}=${b}beta(${c}4${d},${e}5e1)${f};${g}theDist${h}`;
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};
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let squiggleOutput = testRun(
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squiggleString("", "", "", "", "", "", "", "")
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);
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/*
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* Add "\n" to this when multiline is introduced.
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*/
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let whitespaceGen = () => {
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return fc.constantFrom("", " ", "\t", " ", " ", " ", " ");
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};
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fc.assert(
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fc.property(
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whitespaceGen(),
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whitespaceGen(),
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whitespaceGen(),
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whitespaceGen(),
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whitespaceGen(),
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whitespaceGen(),
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whitespaceGen(),
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whitespaceGen(),
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(a, b, c, d, e, f, g, h) => {
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expect(testRun(squiggleString(a, b, c, d, e, f, g, h))).toEqual(
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squiggleOutput
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);
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}
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)
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);
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});
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});
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238
packages/squiggle-lang/__tests__/TS/SampleSet_test.ts
Normal file
238
packages/squiggle-lang/__tests__/TS/SampleSet_test.ts
Normal file
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@ -0,0 +1,238 @@
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import {
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run,
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Distribution,
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squiggleExpression,
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errorValueToString,
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errorValue,
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result,
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} from "../../src/js/index";
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import * as fc from "fast-check";
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let testRun = (x: string): result<squiggleExpression, errorValue> => {
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return run(x, { sampleCount: 1000, xyPointLength: 100 });
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};
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let failDefault = () => expect("codepath should never").toBe("be reached");
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// Beware: float64Array makes it appear in an infinite loop.
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let arrayGen = () =>
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fc.float32Array({
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minLength: 10,
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maxLength: 10000,
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noDefaultInfinity: true,
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noNaN: true,
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});
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describe("SampleSet: cdf", () => {
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let n = 10000
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test("at the highest number in the distribution is within epsilon of 1", () => {
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fc.assert(
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fc.property(arrayGen(), (xs) => {
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let ys = Array.from(xs);
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let max = Math.max(...ys);
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// Should compute with squiglge strings once interpreter has `sample`
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let dist = new Distribution(
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{ tag: "SampleSet", value: ys },
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{ sampleCount: n, xyPointLength: 100 }
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);
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let cdfValue = dist.cdf(max).value
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let min = Math.min(...ys)
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let epsilon = 5e-3;
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if (max - min < epsilon) {
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expect(cdfValue).toBeLessThan(1 - epsilon)
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} else {
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expect(dist.cdf(max).value).toBeGreaterThan(1 - epsilon);
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}
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})
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);
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});
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test("at the lowest number in the distribution is within epsilon of 0", () => {
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fc.assert(
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fc.property(arrayGen(), (xs) => {
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let ys = Array.from(xs);
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let min = Math.min(...ys);
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// Should compute with squiggle strings once interpreter has `sample`
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let dist = new Distribution(
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{ tag: "SampleSet", value: ys },
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{ sampleCount: n, xyPointLength: 100 }
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);
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let cdfValue = dist.cdf(min).value
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let max = Math.max(...ys);
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let epsilon = 5e-3;
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if (max - min < epsilon) {
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expect(cdfValue).toBeGreaterThan(epsilon)
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} else {
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expect(cdfValue).toBeLessThan(epsilon);
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}
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})
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);
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});
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test("is <= 1 everywhere with equality when x is higher than the max", () => {
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fc.assert(
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fc.property(arrayGen(), fc.float(), (xs, x) => {
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let ys = Array.from(xs)
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let dist = new Distribution(
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{ tag: "SampleSet", value: ys },
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{ sampleCount: n, xyPointLength: 100 }
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);
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let cdfValue = dist.cdf(x).value
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let epsilon = 1e-1
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if (x > Math.max(...ys)) { // The really good way to do this is to have epsilon be a function of the percentage by which x > max(ys)
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expect(cdfValue).toBeGreaterThan(1 - epsilon - epsilon ** 2)
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} else {
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expect(cdfValue).toBeLessThan(1);
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}
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})
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);
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});
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test("is >= 0 everywhere with equality when x is lower than the min", () => {
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fc.assert(
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fc.property(arrayGen(), fc.float(), (xs, x) => {
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let ys = Array.from(xs)
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let dist = new Distribution(
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{ tag: "SampleSet", value: ys },
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{ sampleCount: n, xyPointLength: 100 }
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);
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let cdfValue = dist.cdf(x).value
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if (x < Math.min(...ys)) {
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expect(cdfValue).toEqual(0)
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} else {
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expect(cdfValue).toBeGreaterThan(0);
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}
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})
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);
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});
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});
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describe("SampleSet: pdf of extremes is lower than pdf of mean.", () => {
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let n = 1000
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test("a sampleset distribution's pdf assigns less weight to the max than to the mean", () => {
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fc.assert(
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fc.property(arrayGen(), (xs) => {
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let ys = Array.from(xs);
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let max = Math.max(...ys);
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let mean = ys.reduce((a, b) => a + b, 0.0) / ys.length;
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// Should be from squiggleString once interpreter exposes sampleset
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let dist = new Distribution(
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{ tag: "SampleSet", value: ys },
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{ sampleCount: n, xyPointLength: 100 }
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);
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let pdfMean = dist.pdf(mean);
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let pdfMax = dist.pdf(max);
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switch (pdfMax.tag) {
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case "Ok":
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let min = Math.min(...ys)
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switch (pdfMean.tag) {
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case "Ok":
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if (max == min) {
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expect(pdfMax.value).toBeLessThanOrEqual(pdfMean.value);
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} else {
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expect(pdfMax.value).toBeLessThan(pdfMean.value);
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}
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case "Error":
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if (max == min) {
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expect(pdfMean.value).toEqual(1);
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} else {
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expect(pdfMean.value).toEqual("error message");
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}
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default:
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failDefault();
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}
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case "Error":
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switch (pdfMean.tag) {
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case "Ok":
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expect(pdfMax.value).toEqual("error message");
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case "Error":
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expect(pdfMax.value).toEqual(pdfMean.value);
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default:
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failDefault();
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}
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default:
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failDefault();
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}
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})
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);
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});
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});
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// describe("SampleSet: mean is mean", () => {
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// test("mean(samples(xs)) sampling twice as widely as the input", () => {
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// fc.assert(
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// fc.property(
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// fc.float64Array({ minLength: 10, maxLength: 100000 }),
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// (xs) => {
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// let ys = Array.from(xs);
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// let n = ys.length;
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// let dist = new Distribution(
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// { tag: "SampleSet", value: ys },
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// { sampleCount: 2 * n, xyPointLength: 4 * n }
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// );
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//
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// expect(dist.mean().value).toBeCloseTo(
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// ys.reduce((a, b) => a + b, 0.0) / n
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|
// );
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|
// }
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|
// )
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|
// );
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|
// });
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|
//
|
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|
// test("mean(samples(xs)) sampling half as widely as the input", () => {
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// fc.assert(
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// fc.property(
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|
// fc.float64Array({ minLength: 10, maxLength: 100000 }),
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|
// (xs) => {
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|
// let ys = Array.from(xs);
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// let n = ys.length;
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// let dist = new Distribution(
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// { tag: "SampleSet", value: ys },
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// { sampleCount: Math.floor(5 / 2), xyPointLength: 4 * n }
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|
// );
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|
//
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// expect(dist.mean().value).toBeCloseTo(
|
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|
// ys.reduce((a, b) => a + b, 0.0) / n
|
||||||
|
// );
|
||||||
|
// }
|
||||||
|
// )
|
||||||
|
// );
|
||||||
|
// });
|
||||||
|
// });
|
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|
|
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// describe("Mean of mixture is weighted average of means", () => {
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// test("mx(beta(a,b), lognormal(m,s), [x,y])", () => {
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// fc.assert(
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|
// fc.property(
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|
// fc.float({ min: 1e-1 }), // alpha
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|
// fc.float({ min: 1 }), // beta
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// fc.float(), // mu
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// fc.float({ min: 1e-1 }), // sigma
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// fc.float({ min: 1e-7 }),
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// fc.float({ min: 1e-7 }),
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// (a, b, m, s, x, y) => {
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|
// let squiggleString = `mean(mx(beta(${a},${b}), lognormal(${m},${s}), [${x}, ${y}]))`;
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// let res = testRun(squiggleString);
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|
// switch (res.tag) {
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|
// case "Error":
|
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|
// expect(errorValueToString(res.value)).toEqual(
|
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|
// "<I wonder if test cases will find this>"
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||||||
|
// );
|
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// case "Ok":
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// let betaWeight = x / (x + y);
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// let lognormalWeight = y / (x + y);
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// let betaMean = 1 / (1 + b / a);
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// let lognormalMean = m + s ** 2 / 2;
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|
// expect(res.value).toEqual({
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// tag: "number",
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// value: betaWeight * betaMean + lognormalWeight * lognormalMean,
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// });
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|
// default:
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|
// expect("mean returned").toBe(`something other than a number`);
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|
// }
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||||||
|
// }
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|
// )
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||||||
|
// );
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||||||
|
// });
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|
// });
|
62
packages/squiggle-lang/__tests__/TS/Scalars_test.ts
Normal file
62
packages/squiggle-lang/__tests__/TS/Scalars_test.ts
Normal file
|
@ -0,0 +1,62 @@
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|
import {
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||||||
|
run,
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||||||
|
Distribution,
|
||||||
|
resultMap,
|
||||||
|
squiggleExpression,
|
||||||
|
errorValueToString,
|
||||||
|
errorValue,
|
||||||
|
result,
|
||||||
|
} from "../../src/js/index";
|
||||||
|
import * as fc from "fast-check";
|
||||||
|
|
||||||
|
let testRun = (x: string): result<squiggleExpression, errorValue> => {
|
||||||
|
return run(x, { sampleCount: 100, xyPointLength: 100 });
|
||||||
|
};
|
||||||
|
|
||||||
|
describe("Scalar manipulation is well-modeled by javascript math", () => {
|
||||||
|
test("in the case of logarithms (with assignment)", () => {
|
||||||
|
fc.assert(
|
||||||
|
fc.property(fc.float(), (x) => {
|
||||||
|
let squiggleString = `x = log(${x}); x`;
|
||||||
|
let squiggleResult = testRun(squiggleString);
|
||||||
|
if (x == 0) {
|
||||||
|
expect(squiggleResult.value).toEqual({
|
||||||
|
tag: "number",
|
||||||
|
value: -Infinity,
|
||||||
|
});
|
||||||
|
} else if (x < 0) {
|
||||||
|
expect(squiggleResult.value).toEqual({
|
||||||
|
tag: "RETodo",
|
||||||
|
value:
|
||||||
|
"somemessage (confused why a test case hasn't pointed out to me that this message is bogus)",
|
||||||
|
});
|
||||||
|
} else {
|
||||||
|
expect(squiggleResult.value).toEqual({
|
||||||
|
tag: "number",
|
||||||
|
value: Math.log(x),
|
||||||
|
});
|
||||||
|
}
|
||||||
|
})
|
||||||
|
);
|
||||||
|
});
|
||||||
|
|
||||||
|
test("in the case of addition (with assignment)", () => {
|
||||||
|
fc.assert(
|
||||||
|
fc.property(fc.float(), fc.float(), fc.float(), (x, y, z) => {
|
||||||
|
let squiggleString = `x = ${x}; y = ${y}; z = ${z}; x + y + z`;
|
||||||
|
let squiggleResult = testRun(squiggleString);
|
||||||
|
switch (squiggleResult.tag) {
|
||||||
|
case "Error":
|
||||||
|
expect(errorValueToString(squiggleResult.value)).toEqual(
|
||||||
|
"some message (hopefully a test case points it out to me)"
|
||||||
|
);
|
||||||
|
case "Ok":
|
||||||
|
expect(squiggleResult.value).toEqual({
|
||||||
|
tag: "number",
|
||||||
|
value: x + y + z,
|
||||||
|
});
|
||||||
|
}
|
||||||
|
})
|
||||||
|
);
|
||||||
|
});
|
||||||
|
});
|
44
packages/squiggle-lang/__tests__/TS/Symbolic_test.ts
Normal file
44
packages/squiggle-lang/__tests__/TS/Symbolic_test.ts
Normal file
|
@ -0,0 +1,44 @@
|
||||||
|
import {
|
||||||
|
run,
|
||||||
|
squiggleExpression,
|
||||||
|
errorValueToString,
|
||||||
|
errorValue,
|
||||||
|
result,
|
||||||
|
} from "../../src/js/index";
|
||||||
|
import * as fc from "fast-check";
|
||||||
|
|
||||||
|
let testRun = (x: string): result<squiggleExpression, errorValue> => {
|
||||||
|
return run(x, { sampleCount: 100, xyPointLength: 100 });
|
||||||
|
};
|
||||||
|
|
||||||
|
describe("Symbolic mean", () => {
|
||||||
|
let triangularInputError = {
|
||||||
|
tag: "Error",
|
||||||
|
value: {
|
||||||
|
tag: "RETodo",
|
||||||
|
value: "Triangular values must be increasing order.",
|
||||||
|
},
|
||||||
|
};
|
||||||
|
test("mean(triangular(x,y,z))", () => {
|
||||||
|
fc.assert(
|
||||||
|
fc.property(fc.float(), fc.float(), fc.float(), (x, y, z) => {
|
||||||
|
let res = testRun(`mean(triangular(${x},${y},${z}))`);
|
||||||
|
if (!(x < y && y < z)) {
|
||||||
|
expect(res).toEqual(triangularInputError);
|
||||||
|
} else {
|
||||||
|
switch (res.tag) {
|
||||||
|
case "Error":
|
||||||
|
expect(errorValueToString(res.value)).toEqual(
|
||||||
|
"<Test cases don't seem to be finding this>"
|
||||||
|
);
|
||||||
|
case "Ok":
|
||||||
|
expect(res.value).toEqual({
|
||||||
|
tag: "number",
|
||||||
|
value: (x + y + z) / 3,
|
||||||
|
});
|
||||||
|
}
|
||||||
|
}
|
||||||
|
})
|
||||||
|
);
|
||||||
|
});
|
||||||
|
});
|
|
@ -44,6 +44,7 @@
|
||||||
"moduleserve": "0.9.1",
|
"moduleserve": "0.9.1",
|
||||||
"ts-jest": "^27.1.4",
|
"ts-jest": "^27.1.4",
|
||||||
"ts-loader": "^9.2.8",
|
"ts-loader": "^9.2.8",
|
||||||
|
"fast-check": "2.24.0",
|
||||||
"typescript": "^4.6.3",
|
"typescript": "^4.6.3",
|
||||||
"webpack": "^5.72.0",
|
"webpack": "^5.72.0",
|
||||||
"webpack-cli": "^4.9.2"
|
"webpack-cli": "^4.9.2"
|
||||||
|
|
12
yarn.lock
12
yarn.lock
|
@ -8417,6 +8417,13 @@ extglob@^2.0.4:
|
||||||
snapdragon "^0.8.1"
|
snapdragon "^0.8.1"
|
||||||
to-regex "^3.0.1"
|
to-regex "^3.0.1"
|
||||||
|
|
||||||
|
fast-check@2.24.0:
|
||||||
|
version "2.24.0"
|
||||||
|
resolved "https://registry.yarnpkg.com/fast-check/-/fast-check-2.24.0.tgz#39f85586862108a4de6394c5196ebcf8b76b6c8b"
|
||||||
|
integrity sha512-iNXbN90lbabaCUfnW5jyXYPwMJLFYl09eJDkXA9ZoidFlBK63gNRvcKxv+8D1OJ1kIYjwBef4bO/K3qesUeWLQ==
|
||||||
|
dependencies:
|
||||||
|
pure-rand "^5.0.1"
|
||||||
|
|
||||||
fast-deep-equal@^3.1.1, fast-deep-equal@^3.1.3, fast-deep-equal@~3.1.3:
|
fast-deep-equal@^3.1.1, fast-deep-equal@^3.1.3, fast-deep-equal@~3.1.3:
|
||||||
version "3.1.3"
|
version "3.1.3"
|
||||||
resolved "https://registry.yarnpkg.com/fast-deep-equal/-/fast-deep-equal-3.1.3.tgz#3a7d56b559d6cbc3eb512325244e619a65c6c525"
|
resolved "https://registry.yarnpkg.com/fast-deep-equal/-/fast-deep-equal-3.1.3.tgz#3a7d56b559d6cbc3eb512325244e619a65c6c525"
|
||||||
|
@ -13573,6 +13580,11 @@ pure-color@^1.2.0:
|
||||||
resolved "https://registry.yarnpkg.com/pure-color/-/pure-color-1.3.0.tgz#1fe064fb0ac851f0de61320a8bf796836422f33e"
|
resolved "https://registry.yarnpkg.com/pure-color/-/pure-color-1.3.0.tgz#1fe064fb0ac851f0de61320a8bf796836422f33e"
|
||||||
integrity sha1-H+Bk+wrIUfDeYTIKi/eWg2Qi8z4=
|
integrity sha1-H+Bk+wrIUfDeYTIKi/eWg2Qi8z4=
|
||||||
|
|
||||||
|
pure-rand@^5.0.1:
|
||||||
|
version "5.0.1"
|
||||||
|
resolved "https://registry.yarnpkg.com/pure-rand/-/pure-rand-5.0.1.tgz#97a287b4b4960b2a3448c0932bf28f2405cac51d"
|
||||||
|
integrity sha512-ksWccjmXOHU2gJBnH0cK1lSYdvSZ0zLoCMSz/nTGh6hDvCSgcRxDyIcOBD6KNxFz3xhMPm/T267Tbe2JRymKEQ==
|
||||||
|
|
||||||
q@^1.1.2:
|
q@^1.1.2:
|
||||||
version "1.5.1"
|
version "1.5.1"
|
||||||
resolved "https://registry.yarnpkg.com/q/-/q-1.5.1.tgz#7e32f75b41381291d04611f1bf14109ac00651d7"
|
resolved "https://registry.yarnpkg.com/q/-/q-1.5.1.tgz#7e32f75b41381291d04611f1bf14109ac00651d7"
|
||||||
|
|
Loading…
Reference in New Issue
Block a user