property test framework installed but not used; describe(means) section of unit tests filled out
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parent
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commit
0a5a8a5198
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@ -13,6 +13,9 @@ Other:
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yarn start # listens to files and recompiles at every mutation
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yarn test
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yarn test:watch # keeps an active session and runs all tests at every mutation
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# where o := open in osx and o := xdg-open in linux,
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yarn coverage; o _coverage/index.html # produces coverage report and opens it in browser
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```
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# TODO: clean up this README.md
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@ -1,14 +1,18 @@
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open Jest
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open Expect
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open FastCheck
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// open Arbitrary
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open Property.Sync
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let env: DistributionOperation.env = {
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sampleCount: 100,
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xyPointLength: 100,
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}
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let normalDist5: GenericDist_Types.genericDist = Symbolic(#Normal({mean: 5.0, stdev: 2.0}))
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let normalDist10: GenericDist_Types.genericDist = Symbolic(#Normal({mean: 10.0, stdev: 2.0}))
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let normalDist20: GenericDist_Types.genericDist = Symbolic(#Normal({mean: 20.0, stdev: 2.0}))
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let mkNormal = (mean, stdev) => GenericDist_Types.Symbolic(#Normal({mean: mean, stdev: stdev}))
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let normalDist5: GenericDist_Types.genericDist = mkNormal(5.0, 2.0)
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let normalDist10: GenericDist_Types.genericDist = mkNormal(10.0, 2.0)
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let normalDist20: GenericDist_Types.genericDist = mkNormal(20.0, 2.0)
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let uniformDist: GenericDist_Types.genericDist = Symbolic(#Uniform({low: 9.0, high: 10.0}))
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let {toFloat, toDist, toString, toError} = module(DistributionOperation.Output)
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@ -19,18 +23,99 @@ let outputMap = fmap(~env)
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let toExt: option<'a> => 'a = E.O.toExt(
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"Should be impossible to reach (This error is in test file)",
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)
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let unpackFloat = x => x -> toFloat -> toExt
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describe("normalize", () => {
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test("has no impact on normal dist", () => {
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let result = run(FromDist(ToDist(Normalize), normalDist5))
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expect(result)->toEqual(Dist(normalDist5))
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})
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// Test is vapid while I figure out how to get jest to work with fast-check
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// monitor situation here maybe https://github.com/TheSpyder/rescript-fast-check/issues/8 ?
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test("all normals are already normalized", () => {
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expect(assert_(
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property2(
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Arbitrary.double(()),
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Arbitrary.double(()),
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(mean, stdev) => {
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// open! Expect.Operators
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open GenericDist_Types.Operation
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run(FromDist(ToDist(Normalize), mkNormal(mean, stdev))) == DistributionOperation.Dist(mkNormal(mean, stdev))
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}
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)
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)) -> toEqual(())
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})
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})
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describe("mean", () => {
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test("for a normal distribution", () => {
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let result = DistributionOperation.run(~env, FromDist(ToFloat(#Mean), normalDist5))
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expect(result)->toEqual(Float(5.0))
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test("of a normal distribution", () => { // should be property
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run(FromDist(ToFloat(#Mean), normalDist5)) -> unpackFloat -> expect -> toBeCloseTo(5.0)
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})
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test("of an exponential distribution at a small rate", () => { // should be property
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let rate = 1e-7
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let theMean = run(FromDist(ToFloat(#Mean), GenericDist_Types.Symbolic(#Exponential({rate: rate}))))
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theMean -> unpackFloat -> expect -> toBeCloseTo(1.0 /. rate) // https://en.wikipedia.org/wiki/Exponential_distribution#Mean,_variance,_moments,_and_median
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})
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test("of an exponential distribution at a larger rate", () => {
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let rate = 10.0
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let theMean = run(FromDist(ToFloat(#Mean), GenericDist_Types.Symbolic(#Exponential({rate: rate}))))
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theMean -> unpackFloat -> expect -> toBeCloseTo(1.0 /. rate) // https://en.wikipedia.org/wiki/Exponential_distribution#Mean,_variance,_moments,_and_median
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})
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// test("of a cauchy distribution", () => {
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// let result = run(FromDist(ToFloat(#Mean), GenericDist_Types.Symbolic(#Cauchy({local: 1.0, scale: 1.0}))))
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// expect(result) -> toEqual(Error("Cauchy distributions may have no mean value."))
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// })
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test("of a triangular distribution", () => { // should be property
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let theMean = run(FromDist(
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ToFloat(#Mean),
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GenericDist_Types.Symbolic(#Triangular({low: - 5.0, medium: 1e-3, high: 10.0}))
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))
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theMean -> unpackFloat -> expect -> toBeCloseTo((-5.0 +. 1e-3 +. 10.0) /. 3.0) // https://www.statology.org/triangular-distribution/
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})
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test("of a beta distribution with alpha much smaller than beta", () => { // should be property
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let theMean = run(FromDist(
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ToFloat(#Mean),
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GenericDist_Types.Symbolic(#Beta({alpha: 2e-4, beta: 64.0}))
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))
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theMean -> unpackFloat -> expect -> toBeCloseTo(1.0 /. (1.0 +. (64.0 /. 2e-4))) // https://en.wikipedia.org/wiki/Beta_distribution#Mean
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})
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test("of a beta distribution with alpha much larger than beta", () => { // should be property
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let theMean = run(FromDist(
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ToFloat(#Mean),
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GenericDist_Types.Symbolic(#Beta({alpha: 128.0, beta: 1.0}))
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))
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theMean -> unpackFloat -> expect -> toBeCloseTo(1.0 /. (1.0 +. (1.0 /. 128.0))) // https://en.wikipedia.org/wiki/Beta_distribution#Mean
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})
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test("of a lognormal", () => { // should be property
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let theMean = run(FromDist(
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ToFloat(#Mean),
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GenericDist_Types.Symbolic(#Lognormal({mu: 2.0, sigma: 4.0}))
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))
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theMean -> unpackFloat -> expect -> toBeCloseTo(Js.Math.exp(2.0 +. 4.0 ** 2.0 /. 2.0 )) // https://brilliant.org/wiki/log-normal-distribution/
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})
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test("of a uniform", () => {
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let theMean = run(FromDist(
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ToFloat(#Mean),
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GenericDist_Types.Symbolic(#Uniform({low: 1e-5, high: 12.345}))
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))
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theMean -> unpackFloat -> expect -> toBeCloseTo((1e-5 +. 12.345) /. 2.0) // https://en.wikipedia.org/wiki/Continuous_uniform_distribution#Moments
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})
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test("of a float", () => {
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let theMean = run(FromDist(
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ToFloat(#Mean),
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GenericDist_Types.Symbolic(#Float(7.7))
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))
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theMean -> unpackFloat -> expect -> toBeCloseTo(7.7)
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})
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})
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@ -30,6 +30,9 @@
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"rationale",
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"bisect_ppx"
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],
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"bs-dev-dependencies": [
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"rescript-fast-check"
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],
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"gentypeconfig": {
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"language": "typescript",
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"module": "commonjs",
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@ -35,6 +35,7 @@
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"docsify": "^4.12.2",
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"gentype": "^4.3.0",
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"jest": "^27.5.1",
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"rescript-fast-check": "^1.1.1",
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"moduleserve": "0.9.1",
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"ts-jest": "^27.1.4",
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"ts-loader": "^9.2.8",
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@ -55,7 +55,7 @@ module Exponential = {
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rate: rate,
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}),
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)
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: Error("Exponential distributions mean must be larger than 0")
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: Error("Exponential distributions rate must be larger than 0.")
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let pdf = (x, t: t) => Jstat.Exponential.pdf(x, t.rate)
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let cdf = (x, t: t) => Jstat.Exponential.cdf(x, t.rate)
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let inv = (p, t: t) => Jstat.Exponential.inv(p, t.rate)
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@ -71,7 +71,7 @@ module Cauchy = {
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let cdf = (x, t: t) => Jstat.Cauchy.cdf(x, t.local, t.scale)
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let inv = (p, t: t) => Jstat.Cauchy.inv(p, t.local, t.scale)
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let sample = (t: t) => Jstat.Cauchy.sample(t.local, t.scale)
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let mean = (_: t) => Error("Cauchy distributions have no mean value.")
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let mean = (_: t) => Error("Cauchy distributions may have no mean value.")
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let toString = ({local, scale}: t) => j`Cauchy($local, $scale)`
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}
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@ -80,8 +80,8 @@ module Triangular = {
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let make = (low, medium, high): result<symbolicDist, string> =>
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low < medium && medium < high
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? Ok(#Triangular({low: low, medium: medium, high: high}))
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: Error("Triangular values must be increasing order")
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let pdf = (x, t: t) => Jstat.Triangular.pdf(x, t.low, t.high, t.medium)
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: Error("Triangular values must be increasing order.")
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let pdf = (x, t: t) => Jstat.Triangular.pdf(x, t.low, t.high, t.medium) // not obvious in jstat docs that high comes before medium?
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let cdf = (x, t: t) => Jstat.Triangular.cdf(x, t.low, t.high, t.medium)
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let inv = (p, t: t) => Jstat.Triangular.inv(p, t.low, t.high, t.medium)
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let sample = (t: t) => Jstat.Triangular.sample(t.low, t.high, t.medium)
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19
yarn.lock
19
yarn.lock
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@ -8392,6 +8392,13 @@ extglob@^2.0.4:
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snapdragon "^0.8.1"
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to-regex "^3.0.1"
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fast-check@^2.17.0:
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version "2.24.0"
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resolved "https://registry.yarnpkg.com/fast-check/-/fast-check-2.24.0.tgz#39f85586862108a4de6394c5196ebcf8b76b6c8b"
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integrity sha512-iNXbN90lbabaCUfnW5jyXYPwMJLFYl09eJDkXA9ZoidFlBK63gNRvcKxv+8D1OJ1kIYjwBef4bO/K3qesUeWLQ==
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dependencies:
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pure-rand "^5.0.1"
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fast-deep-equal@^3.1.1, fast-deep-equal@^3.1.3, fast-deep-equal@~3.1.3:
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version "3.1.3"
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resolved "https://registry.npmjs.org/fast-deep-equal/-/fast-deep-equal-3.1.3.tgz"
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@ -13524,6 +13531,11 @@ pure-color@^1.2.0:
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resolved "https://registry.yarnpkg.com/pure-color/-/pure-color-1.3.0.tgz#1fe064fb0ac851f0de61320a8bf796836422f33e"
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integrity sha1-H+Bk+wrIUfDeYTIKi/eWg2Qi8z4=
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pure-rand@^5.0.1:
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version "5.0.1"
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resolved "https://registry.yarnpkg.com/pure-rand/-/pure-rand-5.0.1.tgz#97a287b4b4960b2a3448c0932bf28f2405cac51d"
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integrity sha512-ksWccjmXOHU2gJBnH0cK1lSYdvSZ0zLoCMSz/nTGh6hDvCSgcRxDyIcOBD6KNxFz3xhMPm/T267Tbe2JRymKEQ==
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q@^1.1.2:
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version "1.5.1"
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resolved "https://registry.yarnpkg.com/q/-/q-1.5.1.tgz#7e32f75b41381291d04611f1bf14109ac00651d7"
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@ -14712,6 +14724,13 @@ requires-port@^1.0.0:
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resolved "https://registry.yarnpkg.com/requires-port/-/requires-port-1.0.0.tgz#925d2601d39ac485e091cf0da5c6e694dc3dcaff"
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integrity sha1-kl0mAdOaxIXgkc8NpcbmlNw9yv8=
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rescript-fast-check@^1.1.1:
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version "1.1.1"
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resolved "https://registry.yarnpkg.com/rescript-fast-check/-/rescript-fast-check-1.1.1.tgz#ef153cb01254b2f01a738faf85b73327d423d5e1"
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integrity sha512-wxeW0TsL/prkRvEYGbhEiLaLKmYJaECyDcKEWh65hDqP2i76lARzVW3QmYujSYK4OnjAC70dln3X6UC/2m2Huw==
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dependencies:
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fast-check "^2.17.0"
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rescript@^9.1.4:
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version "9.1.4"
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resolved "https://registry.npmjs.org/rescript/-/rescript-9.1.4.tgz"
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