time-to-botec/squiggle/node_modules/@stdlib/stats/base/svariancewd/lib/ndarray.js

/**
* @license Apache-2.0
*
* Copyright (c) 2020 The Stdlib Authors.
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
*    http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/

'use strict';

// MODULES //

var float64ToFloat32 = require( '@stdlib/number/float64/base/to-float32' );


// MAIN //

/**
* Computes the variance of a single-precision floating-point strided array using Welford's algorithm.
*
* ## Method
*
* -   This implementation uses Welford's algorithm for efficient computation, which can be derived as follows. Let
*
*     ```tex
*     \begin{align*}
*     S_n &= n \sigma_n^2 \\
*         &= \sum_{i=1}^{n} (x_i - \mu_n)^2 \\
*         &= \biggl(\sum_{i=1}^{n} x_i^2 \biggr) - n\mu_n^2
*     \end{align*}
*     ```
*
*     Accordingly,
*
*     ```tex
*     \begin{align*}
*     S_n - S_{n-1} &= \sum_{i=1}^{n} x_i^2 - n\mu_n^2 - \sum_{i=1}^{n-1} x_i^2 + (n-1)\mu_{n-1}^2 \\
*                   &= x_n^2 - n\mu_n^2 + (n-1)\mu_{n-1}^2 \\
*                   &= x_n^2 - \mu_{n-1}^2 + n(\mu_{n-1}^2 - \mu_n^2) \\
*                   &= x_n^2 - \mu_{n-1}^2 + n(\mu_{n-1} - \mu_n)(\mu_{n-1} + \mu_n) \\
*                   &= x_n^2 - \mu_{n-1}^2 + (\mu_{n-1} - x_n)(\mu_{n-1} + \mu_n) \\
*                   &= x_n^2 - \mu_{n-1}^2 + \mu_{n-1}^2 - x_n\mu_n - x_n\mu_{n-1} + \mu_n\mu_{n-1} \\
*                   &= x_n^2 - x_n\mu_n - x_n\mu_{n-1} + \mu_n\mu_{n-1} \\
*                   &= (x_n - \mu_{n-1})(x_n - \mu_n) \\
*                   &= S_{n-1} + (x_n - \mu_{n-1})(x_n - \mu_n)
*     \end{align*}
*     ```
*
*     where we use the identity
*
*     ```tex
*     x_n - \mu_{n-1} = n (\mu_n - \mu_{n-1})
*     ```
*
* ## References
*
* -   Welford, B. P. 1962. "Note on a Method for Calculating Corrected Sums of Squares and Products." _Technometrics_ 4 (3). Taylor & Francis: 419–20. doi:[10.1080/00401706.1962.10490022](https://doi.org/10.1080/00401706.1962.10490022).
* -   van Reeken, A. J. 1968. "Letters to the Editor: Dealing with Neely's Algorithms." _Communications of the ACM_ 11 (3): 149–50. doi:[10.1145/362929.362961](https://doi.org/10.1145/362929.362961).
*
* @param {PositiveInteger} N - number of indexed elements
* @param {number} correction - degrees of freedom adjustment
* @param {Float32Array} x - input array
* @param {integer} stride - stride length
* @param {NonNegativeInteger} offset - starting index
* @returns {number} variance
*
* @example
* var Float32Array = require( '@stdlib/array/float32' );
* var floor = require( '@stdlib/math/base/special/floor' );
*
* var x = new Float32Array( [ 2.0, 1.0, 2.0, -2.0, -2.0, 2.0, 3.0, 4.0 ] );
* var N = floor( x.length / 2 );
*
* var v = svariancewd( N, 1, x, 2, 1 );
* // returns 6.25
*/
function svariancewd( N, correction, x, stride, offset ) {
	var delta;
	var mu;
	var M2;
	var ix;
	var v;
	var n;
	var i;

	n = N - correction;
	if ( N <= 0 || n <= 0.0 ) {
		return NaN;
	}
	if ( N === 1 || stride === 0 ) {
		return 0.0;
	}
	ix = offset;
	M2 = 0.0;
	mu = 0.0;
	for ( i = 0; i < N; i++ ) {
		v = x[ ix ];
		delta = float64ToFloat32( v - mu );
		mu = float64ToFloat32( mu + float64ToFloat32( delta / (i+1) ) );
		M2 = float64ToFloat32( M2 + float64ToFloat32( delta * float64ToFloat32( v - mu ) ) ); // eslint-disable-line max-len
		ix += stride;
	}
	return float64ToFloat32( M2 / n );
}


// EXPORTS //

module.exports = svariancewd;