Compare commits
8 Commits
a543bd5b94
...
1521030421
Author | SHA1 | Date | |
---|---|---|---|
1521030421 | |||
0a660ce6a5 | |||
f6af0c33fa | |||
514a41c9f7 | |||
c11ce6b185 | |||
b0f711e9a6 | |||
3f9027a530 | |||
a81c0df329 |
|
@ -1,53 +0,0 @@
|
||||||
# Interface:
|
|
||||||
# make
|
|
||||||
# make build
|
|
||||||
# make format
|
|
||||||
# make run
|
|
||||||
|
|
||||||
# Compiler
|
|
||||||
CC=gcc
|
|
||||||
# CC=tcc # <= faster compilation
|
|
||||||
|
|
||||||
# Main file
|
|
||||||
SRC=example.c ../../squiggle.c
|
|
||||||
OUTPUT=example
|
|
||||||
|
|
||||||
## Dependencies
|
|
||||||
MATH=-lm
|
|
||||||
|
|
||||||
## Flags
|
|
||||||
DEBUG= #'-g'
|
|
||||||
STANDARD=-std=c99
|
|
||||||
WARNINGS=-Wall
|
|
||||||
OPTIMIZED=-O3 #-Ofast
|
|
||||||
# OPENMP=-fopenmp
|
|
||||||
|
|
||||||
## Formatter
|
|
||||||
STYLE_BLUEPRINT=webkit
|
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
|
||||||
|
|
||||||
## make build
|
|
||||||
build: $(SRC)
|
|
||||||
$(CC) $(OPTIMIZED) $(DEBUG) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
|
|
||||||
format: $(SRC)
|
|
||||||
$(FORMATTER) $(SRC)
|
|
||||||
|
|
||||||
run: $(SRC) $(OUTPUT)
|
|
||||||
OMP_NUM_THREADS=1 ./$(OUTPUT) && echo
|
|
||||||
|
|
||||||
time-linux:
|
|
||||||
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
|
||||||
|
|
||||||
@echo "Running 100x and taking avg time $(OUTPUT)"
|
|
||||||
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
|
||||||
|
|
||||||
## Profiling
|
|
||||||
|
|
||||||
profile-linux:
|
|
||||||
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
|
||||||
echo "Must be run as sudo"
|
|
||||||
$(CC) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
sudo perf record ./$(OUTPUT)
|
|
||||||
sudo perf report
|
|
||||||
rm perf.data
|
|
|
@ -1,53 +0,0 @@
|
||||||
# Interface:
|
|
||||||
# make
|
|
||||||
# make build
|
|
||||||
# make format
|
|
||||||
# make run
|
|
||||||
|
|
||||||
# Compiler
|
|
||||||
CC=gcc
|
|
||||||
# CC=tcc # <= faster compilation
|
|
||||||
|
|
||||||
# Main file
|
|
||||||
SRC=example.c ../../squiggle.c
|
|
||||||
OUTPUT=example
|
|
||||||
|
|
||||||
## Dependencies
|
|
||||||
MATH=-lm
|
|
||||||
|
|
||||||
## Flags
|
|
||||||
DEBUG= #'-g'
|
|
||||||
STANDARD=-std=c99
|
|
||||||
WARNINGS=-Wall
|
|
||||||
OPTIMIZED=-O3 #-Ofast
|
|
||||||
# OPENMP=-fopenmp
|
|
||||||
|
|
||||||
## Formatter
|
|
||||||
STYLE_BLUEPRINT=webkit
|
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
|
||||||
|
|
||||||
## make build
|
|
||||||
build: $(SRC)
|
|
||||||
$(CC) $(OPTIMIZED) $(DEBUG) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
|
|
||||||
format: $(SRC)
|
|
||||||
$(FORMATTER) $(SRC)
|
|
||||||
|
|
||||||
run: $(SRC) $(OUTPUT)
|
|
||||||
OMP_NUM_THREADS=1 ./$(OUTPUT) && echo
|
|
||||||
|
|
||||||
time-linux:
|
|
||||||
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
|
||||||
|
|
||||||
@echo "Running 100x and taking avg time $(OUTPUT)"
|
|
||||||
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
|
||||||
|
|
||||||
## Profiling
|
|
||||||
|
|
||||||
profile-linux:
|
|
||||||
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
|
||||||
echo "Must be run as sudo"
|
|
||||||
$(CC) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
sudo perf record ./$(OUTPUT)
|
|
||||||
sudo perf report
|
|
||||||
rm perf.data
|
|
|
@ -1,57 +0,0 @@
|
||||||
# Interface:
|
|
||||||
# make
|
|
||||||
# make build
|
|
||||||
# make format
|
|
||||||
# make run
|
|
||||||
|
|
||||||
# Compiler
|
|
||||||
CC=gcc # required for nested functions
|
|
||||||
# CC=tcc # <= faster compilation
|
|
||||||
|
|
||||||
# Main file
|
|
||||||
SRC=example.c ../../squiggle.c
|
|
||||||
OUTPUT=example
|
|
||||||
|
|
||||||
## Dependencies
|
|
||||||
MATH=-lm
|
|
||||||
DEPENDENCIES=$(MATH)
|
|
||||||
# OPENMP=-fopenmp
|
|
||||||
|
|
||||||
## Flags
|
|
||||||
DEBUG= #'-g'
|
|
||||||
STANDARD=-std=gnu99 ## allows for nested functions.
|
|
||||||
EXTENSIONS= #-fnested-functions
|
|
||||||
WARNINGS=-Wall
|
|
||||||
OPTIMIZED=-O3#-Ofast
|
|
||||||
CFLAGS=$(DEBUG) $(STANDARD) $(EXTENSIONS) $(WARNINGS) $(OPTIMIZED)
|
|
||||||
|
|
||||||
## Formatter
|
|
||||||
STYLE_BLUEPRINT=webkit
|
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
|
||||||
|
|
||||||
## make build
|
|
||||||
build: $(SRC)
|
|
||||||
# gcc -std=gnu99 example.c -lm -o example
|
|
||||||
$(CC) $(CFLAGS) $(SRC) $(DEPENDENCIES) -o $(OUTPUT)
|
|
||||||
|
|
||||||
format: $(SRC)
|
|
||||||
$(FORMATTER) $(SRC)
|
|
||||||
|
|
||||||
run: $(SRC) $(OUTPUT)
|
|
||||||
./$(OUTPUT) && echo
|
|
||||||
|
|
||||||
time-linux:
|
|
||||||
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
|
||||||
|
|
||||||
@echo "Running 100x and taking avg time $(OUTPUT)"
|
|
||||||
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
|
||||||
|
|
||||||
## Profiling
|
|
||||||
|
|
||||||
profile-linux:
|
|
||||||
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
|
||||||
echo "Must be run as sudo"
|
|
||||||
$(CC) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
sudo perf record ./$(OUTPUT)
|
|
||||||
sudo perf report
|
|
||||||
rm perf.data
|
|
Binary file not shown.
|
@ -1,58 +0,0 @@
|
||||||
# Interface:
|
|
||||||
# make
|
|
||||||
# make build
|
|
||||||
# make format
|
|
||||||
# make run
|
|
||||||
|
|
||||||
# Compiler
|
|
||||||
CC=gcc # required for nested functions
|
|
||||||
# CC=tcc # <= faster compilation
|
|
||||||
|
|
||||||
# Main file
|
|
||||||
SRC=example.c ../../squiggle.c ../../squiggle_more.c
|
|
||||||
OUTPUT=./example
|
|
||||||
|
|
||||||
## Dependencies
|
|
||||||
OPENMP=-fopenmp
|
|
||||||
MATH=-lm
|
|
||||||
DEPENDENCIES=$(MATH) $(OPENMP)
|
|
||||||
# OPENMP=-fopenmp
|
|
||||||
|
|
||||||
## Flags
|
|
||||||
DEBUG= #'-g'
|
|
||||||
STANDARD=-std=c99 ## gnu99 allows for nested functions.
|
|
||||||
EXTENSIONS= #-fnested-functions
|
|
||||||
WARNINGS=-Wall
|
|
||||||
OPTIMIZED=-O3#-Ofast
|
|
||||||
CFLAGS=$(DEBUG) $(STANDARD) $(EXTENSIONS) $(WARNINGS) $(OPTIMIZED)
|
|
||||||
|
|
||||||
## Formatter
|
|
||||||
STYLE_BLUEPRINT=webkit
|
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
|
||||||
|
|
||||||
## make build
|
|
||||||
build: $(SRC)
|
|
||||||
# gcc -std=gnu99 example.c -lm -o example
|
|
||||||
$(CC) $(CFLAGS) $(SRC) $(DEPENDENCIES) -o $(OUTPUT)
|
|
||||||
|
|
||||||
format: $(SRC)
|
|
||||||
$(FORMATTER) $(SRC)
|
|
||||||
|
|
||||||
run: $(SRC) $(OUTPUT)
|
|
||||||
./$(OUTPUT) && echo
|
|
||||||
|
|
||||||
time-linux:
|
|
||||||
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
|
||||||
|
|
||||||
@echo "Running 100x and taking avg time $(OUTPUT)"
|
|
||||||
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
|
||||||
|
|
||||||
## Profiling
|
|
||||||
|
|
||||||
profile-linux:
|
|
||||||
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
|
||||||
echo "Must be run as sudo"
|
|
||||||
$(CC) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
sudo perf record ./$(OUTPUT)
|
|
||||||
sudo perf report
|
|
||||||
rm perf.data
|
|
Binary file not shown.
|
@ -1,58 +0,0 @@
|
||||||
# Interface:
|
|
||||||
# make
|
|
||||||
# make build
|
|
||||||
# make format
|
|
||||||
# make run
|
|
||||||
|
|
||||||
# Compiler
|
|
||||||
# CC=gcc # required for nested functions
|
|
||||||
# CC=tcc # <= faster compilation
|
|
||||||
|
|
||||||
# Main file
|
|
||||||
SRC=example.c ../../squiggle.c ../../squiggle_more.c
|
|
||||||
OUTPUT=./example
|
|
||||||
|
|
||||||
## Dependencies
|
|
||||||
MATH=-lm
|
|
||||||
DEPENDENCIES=$(MATH)
|
|
||||||
# OPENMP=-fopenmp
|
|
||||||
|
|
||||||
## Flags
|
|
||||||
VERBOSE=#-v
|
|
||||||
DEBUG= #'-g'
|
|
||||||
STANDARD=-std=c99 ## gnu99 allows for nested functions.
|
|
||||||
EXTENSIONS= #-fnested-functions
|
|
||||||
WARNINGS=-Wall
|
|
||||||
OPTIMIZED=-O3#-Ofast
|
|
||||||
CFLAGS=$(VERBOSE) $(DEBUG) $(STANDARD) $(EXTENSIONS) $(WARNINGS) $(OPTIMIZED)
|
|
||||||
|
|
||||||
## Formatter
|
|
||||||
STYLE_BLUEPRINT=webkit
|
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
|
||||||
|
|
||||||
## make build
|
|
||||||
build: $(SRC)
|
|
||||||
# gcc -std=gnu99 example.c -lm -o example
|
|
||||||
$(CC) $(CFLAGS) $(SRC) $(DEPENDENCIES) -o $(OUTPUT)
|
|
||||||
|
|
||||||
format: $(SRC)
|
|
||||||
$(FORMATTER) $(SRC)
|
|
||||||
|
|
||||||
run: $(SRC) $(OUTPUT)
|
|
||||||
./$(OUTPUT) && echo
|
|
||||||
|
|
||||||
time-linux:
|
|
||||||
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
|
||||||
|
|
||||||
@echo "Running 100x and taking avg time $(OUTPUT)"
|
|
||||||
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
|
||||||
|
|
||||||
## Profiling
|
|
||||||
|
|
||||||
profile-linux:
|
|
||||||
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
|
||||||
echo "Must be run as sudo"
|
|
||||||
$(CC) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
sudo perf record ./$(OUTPUT)
|
|
||||||
sudo perf report
|
|
||||||
rm perf.data
|
|
|
@ -1,53 +0,0 @@
|
||||||
# Interface:
|
|
||||||
# make
|
|
||||||
# make build
|
|
||||||
# make format
|
|
||||||
# make run
|
|
||||||
|
|
||||||
# Compiler
|
|
||||||
CC=gcc
|
|
||||||
# CC=tcc # <= faster compilation
|
|
||||||
|
|
||||||
# Main file
|
|
||||||
SRC=example.c ../../squiggle.c
|
|
||||||
OUTPUT=example
|
|
||||||
|
|
||||||
## Dependencies
|
|
||||||
MATH=-lm
|
|
||||||
|
|
||||||
## Flags
|
|
||||||
DEBUG= #'-g'
|
|
||||||
STANDARD=-std=c99
|
|
||||||
WARNINGS=-Wall
|
|
||||||
OPTIMIZED=-O3 #-Ofast
|
|
||||||
# OPENMP=-fopenmp
|
|
||||||
|
|
||||||
## Formatter
|
|
||||||
STYLE_BLUEPRINT=webkit
|
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
|
||||||
|
|
||||||
## make build
|
|
||||||
build: $(SRC)
|
|
||||||
$(CC) $(OPTIMIZED) $(DEBUG) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
|
|
||||||
format: $(SRC)
|
|
||||||
$(FORMATTER) $(SRC)
|
|
||||||
|
|
||||||
run: $(SRC) $(OUTPUT)
|
|
||||||
OMP_NUM_THREADS=1 ./$(OUTPUT) && echo
|
|
||||||
|
|
||||||
time-linux:
|
|
||||||
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
|
||||||
|
|
||||||
@echo "Running 100x and taking avg time $(OUTPUT)"
|
|
||||||
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
|
||||||
|
|
||||||
## Profiling
|
|
||||||
|
|
||||||
profile-linux:
|
|
||||||
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
|
||||||
echo "Must be run as sudo"
|
|
||||||
$(CC) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
sudo perf record ./$(OUTPUT)
|
|
||||||
sudo perf report
|
|
||||||
rm perf.data
|
|
Binary file not shown.
|
@ -1,58 +0,0 @@
|
||||||
# Interface:
|
|
||||||
# make
|
|
||||||
# make build
|
|
||||||
# make format
|
|
||||||
# make run
|
|
||||||
|
|
||||||
# Compiler
|
|
||||||
CC=gcc # required for nested functions
|
|
||||||
# CC=tcc # <= faster compilation
|
|
||||||
|
|
||||||
# Main file
|
|
||||||
SRC=example.c ../../squiggle.c ../../squiggle_more.c
|
|
||||||
OUTPUT=./example
|
|
||||||
|
|
||||||
## Dependencies
|
|
||||||
OPENMP=-fopenmp
|
|
||||||
MATH=-lm
|
|
||||||
DEPENDENCIES=$(MATH) $(OPENMP)
|
|
||||||
# OPENMP=-fopenmp
|
|
||||||
|
|
||||||
## Flags
|
|
||||||
DEBUG= #'-g'
|
|
||||||
STANDARD=-std=c99 ## gnu99 allows for nested functions.
|
|
||||||
EXTENSIONS= #-fnested-functions
|
|
||||||
WARNINGS=-Wall
|
|
||||||
OPTIMIZED=-O3#-Ofast
|
|
||||||
CFLAGS=$(DEBUG) $(STANDARD) $(EXTENSIONS) $(WARNINGS) $(OPTIMIZED)
|
|
||||||
|
|
||||||
## Formatter
|
|
||||||
STYLE_BLUEPRINT=webkit
|
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
|
||||||
|
|
||||||
## make build
|
|
||||||
build: $(SRC)
|
|
||||||
# gcc -std=gnu99 example.c -lm -o example
|
|
||||||
$(CC) $(CFLAGS) $(SRC) $(DEPENDENCIES) -o $(OUTPUT)
|
|
||||||
|
|
||||||
format: $(SRC)
|
|
||||||
$(FORMATTER) $(SRC)
|
|
||||||
|
|
||||||
run: $(SRC) $(OUTPUT)
|
|
||||||
./$(OUTPUT) && echo
|
|
||||||
|
|
||||||
time-linux:
|
|
||||||
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
|
||||||
|
|
||||||
@echo "Running 100x and taking avg time $(OUTPUT)"
|
|
||||||
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
|
||||||
|
|
||||||
## Profiling
|
|
||||||
|
|
||||||
profile-linux:
|
|
||||||
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
|
||||||
echo "Must be run as sudo"
|
|
||||||
$(CC) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
sudo perf record ./$(OUTPUT)
|
|
||||||
sudo perf report
|
|
||||||
rm perf.data
|
|
Binary file not shown.
|
@ -1,53 +0,0 @@
|
||||||
# Interface:
|
|
||||||
# make
|
|
||||||
# make build
|
|
||||||
# make format
|
|
||||||
# make run
|
|
||||||
|
|
||||||
# Compiler
|
|
||||||
CC=gcc
|
|
||||||
# CC=tcc # <= faster compilation
|
|
||||||
|
|
||||||
# Main file
|
|
||||||
SRC=example.c ../../squiggle.c ../../squiggle_more.c
|
|
||||||
OUTPUT=example
|
|
||||||
|
|
||||||
## Dependencies
|
|
||||||
MATH=-lm
|
|
||||||
|
|
||||||
## Flags
|
|
||||||
DEBUG= #'-g'
|
|
||||||
STANDARD=-std=c99
|
|
||||||
WARNINGS=-Wall
|
|
||||||
OPTIMIZED=-O3 #-Ofast
|
|
||||||
# OPENMP=-fopenmp
|
|
||||||
|
|
||||||
## Formatter
|
|
||||||
STYLE_BLUEPRINT=webkit
|
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
|
||||||
|
|
||||||
## make build
|
|
||||||
build: $(SRC)
|
|
||||||
$(CC) $(OPTIMIZED) $(DEBUG) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
|
|
||||||
format: $(SRC)
|
|
||||||
$(FORMATTER) $(SRC)
|
|
||||||
|
|
||||||
run: $(SRC) $(OUTPUT)
|
|
||||||
OMP_NUM_THREADS=1 ./$(OUTPUT) && echo
|
|
||||||
|
|
||||||
time-linux:
|
|
||||||
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
|
||||||
|
|
||||||
@echo "Running 100x and taking avg time $(OUTPUT)"
|
|
||||||
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
|
||||||
|
|
||||||
## Profiling
|
|
||||||
|
|
||||||
profile-linux:
|
|
||||||
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
|
||||||
echo "Must be run as sudo"
|
|
||||||
$(CC) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
sudo perf record ./$(OUTPUT)
|
|
||||||
sudo perf report
|
|
||||||
rm perf.data
|
|
Binary file not shown.
|
@ -1,57 +0,0 @@
|
||||||
# Interface:
|
|
||||||
# make
|
|
||||||
# make build
|
|
||||||
# make format
|
|
||||||
# make run
|
|
||||||
|
|
||||||
# Compiler
|
|
||||||
CC=gcc # required for nested functions
|
|
||||||
# CC=tcc # <= faster compilation
|
|
||||||
|
|
||||||
# Main file
|
|
||||||
SRC=example.c ../../squiggle.c ../../squiggle_more.c
|
|
||||||
OUTPUT=./example
|
|
||||||
|
|
||||||
## Dependencies
|
|
||||||
MATH=-lm
|
|
||||||
DEPENDENCIES=$(MATH)
|
|
||||||
# OPENMP=-fopenmp
|
|
||||||
|
|
||||||
## Flags
|
|
||||||
DEBUG= #'-g'
|
|
||||||
STANDARD=-std=c99 ## gnu99 allows for nested functions.
|
|
||||||
EXTENSIONS= #-fnested-functions
|
|
||||||
WARNINGS=-Wall
|
|
||||||
OPTIMIZED=-O3#-Ofast
|
|
||||||
CFLAGS=$(DEBUG) $(STANDARD) $(EXTENSIONS) $(WARNINGS) $(OPTIMIZED)
|
|
||||||
|
|
||||||
## Formatter
|
|
||||||
STYLE_BLUEPRINT=webkit
|
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
|
||||||
|
|
||||||
## make build
|
|
||||||
build: $(SRC)
|
|
||||||
# gcc -std=gnu99 example.c -lm -o example
|
|
||||||
$(CC) $(CFLAGS) $(SRC) $(DEPENDENCIES) -o $(OUTPUT)
|
|
||||||
|
|
||||||
format: $(SRC)
|
|
||||||
$(FORMATTER) $(SRC)
|
|
||||||
|
|
||||||
run: $(SRC) $(OUTPUT)
|
|
||||||
./$(OUTPUT) && echo
|
|
||||||
|
|
||||||
time-linux:
|
|
||||||
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
|
||||||
|
|
||||||
@echo "Running 100x and taking avg time $(OUTPUT)"
|
|
||||||
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
|
||||||
|
|
||||||
## Profiling
|
|
||||||
|
|
||||||
profile-linux:
|
|
||||||
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
|
||||||
echo "Must be run as sudo"
|
|
||||||
$(CC) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
sudo perf record ./$(OUTPUT)
|
|
||||||
sudo perf report
|
|
||||||
rm perf.data
|
|
Binary file not shown.
|
@ -1,57 +0,0 @@
|
||||||
# Interface:
|
|
||||||
# make
|
|
||||||
# make build
|
|
||||||
# make format
|
|
||||||
# make run
|
|
||||||
|
|
||||||
# Compiler
|
|
||||||
CC=gcc # required for nested functions
|
|
||||||
# CC=tcc # <= faster compilation
|
|
||||||
|
|
||||||
# Main file
|
|
||||||
SRC=example.c ../../squiggle.c ../../squiggle_more.c
|
|
||||||
OUTPUT=./example
|
|
||||||
|
|
||||||
## Dependencies
|
|
||||||
MATH=-lm
|
|
||||||
DEPENDENCIES=$(MATH)
|
|
||||||
# OPENMP=-fopenmp
|
|
||||||
|
|
||||||
## Flags
|
|
||||||
DEBUG= #'-g'
|
|
||||||
STANDARD=-std=c99 ## gnu99 allows for nested functions.
|
|
||||||
EXTENSIONS= #-fnested-functions
|
|
||||||
WARNINGS=-Wall
|
|
||||||
OPTIMIZED=-O3#-Ofast
|
|
||||||
CFLAGS=$(DEBUG) $(STANDARD) $(EXTENSIONS) $(WARNINGS) $(OPTIMIZED)
|
|
||||||
|
|
||||||
## Formatter
|
|
||||||
STYLE_BLUEPRINT=webkit
|
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
|
||||||
|
|
||||||
## make build
|
|
||||||
build: $(SRC)
|
|
||||||
# gcc -std=gnu99 example.c -lm -o example
|
|
||||||
$(CC) $(CFLAGS) $(SRC) $(DEPENDENCIES) -o $(OUTPUT)
|
|
||||||
|
|
||||||
format: $(SRC)
|
|
||||||
$(FORMATTER) $(SRC)
|
|
||||||
|
|
||||||
run: $(SRC) $(OUTPUT)
|
|
||||||
./$(OUTPUT) && echo
|
|
||||||
|
|
||||||
time-linux:
|
|
||||||
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
|
||||||
|
|
||||||
@echo "Running 100x and taking avg time $(OUTPUT)"
|
|
||||||
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
|
||||||
|
|
||||||
## Profiling
|
|
||||||
|
|
||||||
profile-linux:
|
|
||||||
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
|
||||||
echo "Must be run as sudo"
|
|
||||||
$(CC) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
sudo perf record ./$(OUTPUT)
|
|
||||||
sudo perf report
|
|
||||||
rm perf.data
|
|
Binary file not shown.
|
@ -1,57 +0,0 @@
|
||||||
# Interface:
|
|
||||||
# make
|
|
||||||
# make build
|
|
||||||
# make format
|
|
||||||
# make run
|
|
||||||
|
|
||||||
# Compiler
|
|
||||||
CC=gcc # required for nested functions
|
|
||||||
# CC=tcc # <= faster compilation
|
|
||||||
|
|
||||||
# Main file
|
|
||||||
SRC=example.c ../../squiggle.c ../../squiggle_more.c
|
|
||||||
OUTPUT=./example
|
|
||||||
|
|
||||||
## Dependencies
|
|
||||||
MATH=-lm
|
|
||||||
DEPENDENCIES=$(MATH)
|
|
||||||
# OPENMP=-fopenmp
|
|
||||||
|
|
||||||
## Flags
|
|
||||||
DEBUG= #'-g'
|
|
||||||
STANDARD=-std=c99 ## gnu99 allows for nested functions.
|
|
||||||
EXTENSIONS= #-fnested-functions
|
|
||||||
WARNINGS=-Wall
|
|
||||||
OPTIMIZED=-O3#-Ofast
|
|
||||||
CFLAGS=$(DEBUG) $(STANDARD) $(EXTENSIONS) $(WARNINGS) $(OPTIMIZED)
|
|
||||||
|
|
||||||
## Formatter
|
|
||||||
STYLE_BLUEPRINT=webkit
|
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
|
||||||
|
|
||||||
## make build
|
|
||||||
build: $(SRC)
|
|
||||||
# gcc -std=gnu99 example.c -lm -o example
|
|
||||||
$(CC) $(CFLAGS) $(SRC) $(DEPENDENCIES) -o $(OUTPUT)
|
|
||||||
|
|
||||||
format: $(SRC)
|
|
||||||
$(FORMATTER) $(SRC)
|
|
||||||
|
|
||||||
run: $(SRC) $(OUTPUT)
|
|
||||||
./$(OUTPUT) && echo
|
|
||||||
|
|
||||||
time-linux:
|
|
||||||
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
|
||||||
|
|
||||||
@echo "Running 100x and taking avg time $(OUTPUT)"
|
|
||||||
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
|
||||||
|
|
||||||
## Profiling
|
|
||||||
|
|
||||||
profile-linux:
|
|
||||||
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
|
||||||
echo "Must be run as sudo"
|
|
||||||
$(CC) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
sudo perf record ./$(OUTPUT)
|
|
||||||
sudo perf report
|
|
||||||
rm perf.data
|
|
Binary file not shown.
|
@ -1,57 +0,0 @@
|
||||||
# Interface:
|
|
||||||
# make
|
|
||||||
# make build
|
|
||||||
# make format
|
|
||||||
# make run
|
|
||||||
|
|
||||||
# Compiler
|
|
||||||
CC=gcc # required for nested functions
|
|
||||||
# CC=tcc # <= faster compilation
|
|
||||||
|
|
||||||
# Main file
|
|
||||||
SRC=example.c ../../squiggle.c ../../squiggle_more.c
|
|
||||||
OUTPUT=./example
|
|
||||||
|
|
||||||
## Dependencies
|
|
||||||
MATH=-lm
|
|
||||||
DEPENDENCIES=$(MATH)
|
|
||||||
# OPENMP=-fopenmp
|
|
||||||
|
|
||||||
## Flags
|
|
||||||
DEBUG= #'-g'
|
|
||||||
STANDARD=-std=c99 ## gnu99 allows for nested functions.
|
|
||||||
EXTENSIONS= #-fnested-functions
|
|
||||||
WARNINGS=-Wall
|
|
||||||
OPTIMIZED=-O3#-Ofast
|
|
||||||
CFLAGS=$(DEBUG) $(STANDARD) $(EXTENSIONS) $(WARNINGS) $(OPTIMIZED)
|
|
||||||
|
|
||||||
## Formatter
|
|
||||||
STYLE_BLUEPRINT=webkit
|
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
|
||||||
|
|
||||||
## make build
|
|
||||||
build: $(SRC)
|
|
||||||
# gcc -std=gnu99 example.c -lm -o example
|
|
||||||
$(CC) $(CFLAGS) $(SRC) $(DEPENDENCIES) -o $(OUTPUT)
|
|
||||||
|
|
||||||
format: $(SRC)
|
|
||||||
$(FORMATTER) $(SRC)
|
|
||||||
|
|
||||||
run: $(SRC) $(OUTPUT)
|
|
||||||
./$(OUTPUT) && echo
|
|
||||||
|
|
||||||
time-linux:
|
|
||||||
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
|
||||||
|
|
||||||
@echo "Running 100x and taking avg time $(OUTPUT)"
|
|
||||||
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
|
||||||
|
|
||||||
## Profiling
|
|
||||||
|
|
||||||
profile-linux:
|
|
||||||
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
|
||||||
echo "Must be run as sudo"
|
|
||||||
$(CC) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
sudo perf record ./$(OUTPUT)
|
|
||||||
sudo perf report
|
|
||||||
rm perf.data
|
|
Binary file not shown.
|
@ -1,57 +0,0 @@
|
||||||
# Interface:
|
|
||||||
# make
|
|
||||||
# make build
|
|
||||||
# make format
|
|
||||||
# make run
|
|
||||||
|
|
||||||
# Compiler
|
|
||||||
CC=gcc # required for nested functions
|
|
||||||
# CC=tcc # <= faster compilation
|
|
||||||
|
|
||||||
# Main file
|
|
||||||
SRC=example.c ../../squiggle.c ../../squiggle_more.c
|
|
||||||
OUTPUT=./example
|
|
||||||
|
|
||||||
## Dependencies
|
|
||||||
MATH=-lm
|
|
||||||
DEPENDENCIES=$(MATH)
|
|
||||||
# OPENMP=-fopenmp
|
|
||||||
|
|
||||||
## Flags
|
|
||||||
DEBUG= #'-g'
|
|
||||||
STANDARD=-std=c99 ## gnu99 allows for nested functions.
|
|
||||||
EXTENSIONS= #-fnested-functions
|
|
||||||
WARNINGS=-Wall
|
|
||||||
OPTIMIZED=-O3#-Ofast
|
|
||||||
CFLAGS=$(DEBUG) $(STANDARD) $(EXTENSIONS) $(WARNINGS) $(OPTIMIZED)
|
|
||||||
|
|
||||||
## Formatter
|
|
||||||
STYLE_BLUEPRINT=webkit
|
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
|
||||||
|
|
||||||
## make build
|
|
||||||
build: $(SRC)
|
|
||||||
# gcc -std=gnu99 example.c -lm -o example
|
|
||||||
$(CC) $(CFLAGS) $(SRC) $(DEPENDENCIES) -o $(OUTPUT)
|
|
||||||
|
|
||||||
format: $(SRC)
|
|
||||||
$(FORMATTER) $(SRC)
|
|
||||||
|
|
||||||
run: $(SRC) $(OUTPUT)
|
|
||||||
./$(OUTPUT) && echo
|
|
||||||
|
|
||||||
time-linux:
|
|
||||||
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
|
||||||
|
|
||||||
@echo "Running 100x and taking avg time $(OUTPUT)"
|
|
||||||
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
|
||||||
|
|
||||||
## Profiling
|
|
||||||
|
|
||||||
profile-linux:
|
|
||||||
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
|
||||||
echo "Must be run as sudo"
|
|
||||||
$(CC) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
sudo perf record ./$(OUTPUT)
|
|
||||||
sudo perf report
|
|
||||||
rm perf.data
|
|
Binary file not shown.
|
@ -1,57 +0,0 @@
|
||||||
# Interface:
|
|
||||||
# make
|
|
||||||
# make build
|
|
||||||
# make format
|
|
||||||
# make run
|
|
||||||
|
|
||||||
# Compiler
|
|
||||||
CC=gcc # required for nested functions
|
|
||||||
# CC=tcc # <= faster compilation
|
|
||||||
|
|
||||||
# Main file
|
|
||||||
SRC=example.c ../../squiggle.c ../../squiggle_more.c
|
|
||||||
OUTPUT=./example
|
|
||||||
|
|
||||||
## Dependencies
|
|
||||||
MATH=-lm
|
|
||||||
DEPENDENCIES=$(MATH)
|
|
||||||
# OPENMP=-fopenmp
|
|
||||||
|
|
||||||
## Flags
|
|
||||||
DEBUG= #'-g'
|
|
||||||
STANDARD=-std=c99 ## gnu99 allows for nested functions.
|
|
||||||
EXTENSIONS= #-fnested-functions
|
|
||||||
WARNINGS=-Wall
|
|
||||||
OPTIMIZED=-O3#-Ofast
|
|
||||||
CFLAGS=$(DEBUG) $(STANDARD) $(EXTENSIONS) $(WARNINGS) $(OPTIMIZED)
|
|
||||||
|
|
||||||
## Formatter
|
|
||||||
STYLE_BLUEPRINT=webkit
|
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
|
||||||
|
|
||||||
## make build
|
|
||||||
build: $(SRC)
|
|
||||||
# gcc -std=gnu99 example.c -lm -o example
|
|
||||||
$(CC) $(CFLAGS) $(SRC) $(DEPENDENCIES) -o $(OUTPUT)
|
|
||||||
|
|
||||||
format: $(SRC)
|
|
||||||
$(FORMATTER) $(SRC)
|
|
||||||
|
|
||||||
run: $(SRC) $(OUTPUT)
|
|
||||||
./$(OUTPUT) && echo
|
|
||||||
|
|
||||||
time-linux:
|
|
||||||
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
|
||||||
|
|
||||||
@echo "Running 100x and taking avg time $(OUTPUT)"
|
|
||||||
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
|
||||||
|
|
||||||
## Profiling
|
|
||||||
|
|
||||||
profile-linux:
|
|
||||||
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
|
||||||
echo "Must be run as sudo"
|
|
||||||
$(CC) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
sudo perf record ./$(OUTPUT)
|
|
||||||
sudo perf report
|
|
||||||
rm perf.data
|
|
|
@ -1,53 +0,0 @@
|
||||||
# Interface:
|
|
||||||
# make
|
|
||||||
# make build
|
|
||||||
# make format
|
|
||||||
# make run
|
|
||||||
|
|
||||||
# Compiler
|
|
||||||
CC=gcc
|
|
||||||
# CC=tcc # <= faster compilation
|
|
||||||
|
|
||||||
# Main file
|
|
||||||
SRC=example.c ../../squiggle.c
|
|
||||||
OUTPUT=example
|
|
||||||
|
|
||||||
## Dependencies
|
|
||||||
MATH=-lm
|
|
||||||
|
|
||||||
## Flags
|
|
||||||
DEBUG= #'-g'
|
|
||||||
STANDARD=-std=c99
|
|
||||||
WARNINGS=-Wall
|
|
||||||
OPTIMIZED=-O3 #-Ofast
|
|
||||||
# OPENMP=-fopenmp
|
|
||||||
|
|
||||||
## Formatter
|
|
||||||
STYLE_BLUEPRINT=webkit
|
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
|
||||||
|
|
||||||
## make build
|
|
||||||
build: $(SRC)
|
|
||||||
$(CC) $(OPTIMIZED) $(DEBUG) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
|
|
||||||
format: $(SRC)
|
|
||||||
$(FORMATTER) $(SRC)
|
|
||||||
|
|
||||||
run: $(SRC) $(OUTPUT)
|
|
||||||
./$(OUTPUT) && echo
|
|
||||||
|
|
||||||
time-linux:
|
|
||||||
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
|
||||||
|
|
||||||
@echo "Running 100x and taking avg time $(OUTPUT)"
|
|
||||||
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do ./$(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
|
||||||
|
|
||||||
## Profiling
|
|
||||||
|
|
||||||
profile-linux:
|
|
||||||
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
|
||||||
echo "Must be run as sudo"
|
|
||||||
$(CC) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
sudo perf record ./$(OUTPUT)
|
|
||||||
sudo perf report
|
|
||||||
rm perf.data
|
|
|
@ -1,53 +0,0 @@
|
||||||
# Interface:
|
|
||||||
# make
|
|
||||||
# make build
|
|
||||||
# make format
|
|
||||||
# make run
|
|
||||||
|
|
||||||
# Compiler
|
|
||||||
CC=gcc
|
|
||||||
# CC=tcc # <= faster compilation
|
|
||||||
|
|
||||||
# Main file
|
|
||||||
SRC=example.c ../../squiggle.c
|
|
||||||
OUTPUT=example
|
|
||||||
|
|
||||||
## Dependencies
|
|
||||||
MATH=-lm
|
|
||||||
|
|
||||||
## Flags
|
|
||||||
DEBUG= #'-g'
|
|
||||||
STANDARD=-std=c99
|
|
||||||
WARNINGS=-Wall
|
|
||||||
OPTIMIZED=-O3 #-Ofast
|
|
||||||
# OPENMP=-fopenmp
|
|
||||||
|
|
||||||
## Formatter
|
|
||||||
STYLE_BLUEPRINT=webkit
|
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
|
||||||
|
|
||||||
## make build
|
|
||||||
build: $(SRC)
|
|
||||||
$(CC) $(OPTIMIZED) $(DEBUG) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
|
|
||||||
format: $(SRC)
|
|
||||||
$(FORMATTER) $(SRC)
|
|
||||||
|
|
||||||
run: $(SRC) $(OUTPUT)
|
|
||||||
OMP_NUM_THREADS=1 ./$(OUTPUT) && echo
|
|
||||||
|
|
||||||
time-linux:
|
|
||||||
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
|
||||||
|
|
||||||
@echo "Running 100x and taking avg time $(OUTPUT)"
|
|
||||||
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
|
||||||
|
|
||||||
## Profiling
|
|
||||||
|
|
||||||
profile-linux:
|
|
||||||
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
|
||||||
echo "Must be run as sudo"
|
|
||||||
$(CC) $(SRC) $(MATH) -o $(OUTPUT)
|
|
||||||
sudo perf record ./$(OUTPUT)
|
|
||||||
sudo perf report
|
|
||||||
rm perf.data
|
|
|
@ -1,4 +1,4 @@
|
||||||
#include "../../squiggle.h"
|
#include "../../../squiggle.h"
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
||||||
#include <stdlib.h>
|
#include <stdlib.h>
|
|
@ -1,4 +1,4 @@
|
||||||
#include "../../squiggle.h"
|
#include "../../../squiggle.h"
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
||||||
#include <stdlib.h>
|
#include <stdlib.h>
|
|
@ -1,4 +1,4 @@
|
||||||
#include "../../squiggle.h"
|
#include "../../../squiggle.h"
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
||||||
#include <stdlib.h>
|
#include <stdlib.h>
|
Binary file not shown.
|
@ -1,4 +1,4 @@
|
||||||
#include "../../squiggle.h"
|
#include "../../../squiggle.h"
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
||||||
#include <stdlib.h>
|
#include <stdlib.h>
|
||||||
|
@ -15,6 +15,7 @@ int main()
|
||||||
|
|
||||||
int n_dists = 4;
|
int n_dists = 4;
|
||||||
|
|
||||||
|
// These are nested functions. They will not compile without gcc.
|
||||||
double sample_0(uint64_t * seed) { return 0; }
|
double sample_0(uint64_t * seed) { return 0; }
|
||||||
double sample_1(uint64_t * seed) { return 1; }
|
double sample_1(uint64_t * seed) { return 1; }
|
||||||
double sample_few(uint64_t * seed) { return sample_to(1, 3, seed); }
|
double sample_few(uint64_t * seed) { return sample_to(1, 3, seed); }
|
|
@ -1,4 +1,4 @@
|
||||||
#include "../../squiggle.h"
|
#include "../../../squiggle.h"
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
||||||
#include <stdlib.h>
|
#include <stdlib.h>
|
|
@ -1,4 +1,4 @@
|
||||||
#include "../../squiggle.h"
|
#include "../../../squiggle.h"
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
||||||
#include <stdlib.h>
|
#include <stdlib.h>
|
85
examples/core/makefile
Normal file
85
examples/core/makefile
Normal file
|
@ -0,0 +1,85 @@
|
||||||
|
# Interface:
|
||||||
|
# make all
|
||||||
|
# make format-all
|
||||||
|
# make run-all
|
||||||
|
# make one DIR=01_one_sample
|
||||||
|
# make format-one DIR=01_one_sample
|
||||||
|
# make run-one DIR=01_one_sample
|
||||||
|
# make time-linux-one DIR=01_one_sample
|
||||||
|
# make profile-one DIR=01_one_sample
|
||||||
|
|
||||||
|
# Compiler
|
||||||
|
CC=gcc
|
||||||
|
# CC=tcc # <= faster compilation
|
||||||
|
|
||||||
|
# Main file
|
||||||
|
SRC=example.c
|
||||||
|
OUTPUT=example
|
||||||
|
|
||||||
|
## Dependencies
|
||||||
|
SQUIGGLE=../../squiggle.c
|
||||||
|
MATH=-lm
|
||||||
|
DEPS=$(SQUIGGLE) $(MATH)
|
||||||
|
|
||||||
|
## Flags
|
||||||
|
DEBUG= #'-g'
|
||||||
|
STANDARD=-std=c99
|
||||||
|
WARNINGS=-Wall
|
||||||
|
OPTIMIZED=-O3 #-Ofast
|
||||||
|
|
||||||
|
## Formatter
|
||||||
|
STYLE_BLUEPRINT=webkit
|
||||||
|
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
||||||
|
|
||||||
|
## make all
|
||||||
|
all:
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 00_example_template/$(SRC) $(DEPS) -o 00_example_template/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 01_one_sample/$(SRC) $(DEPS) -o 01_one_sample/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 02_time_to_botec/$(SRC) $(DEPS) -o 02_time_to_botec/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 03_gcc_nested_function/$(SRC) $(DEPS) -o 03_gcc_nested_function/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 04_gamma_beta/$(SRC) $(DEPS) -o 04_gamma_beta/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 05_hundred_lognormals/$(SRC) $(DEPS) -o 05_hundred_lognormals/$(OUTPUT)
|
||||||
|
|
||||||
|
format-all:
|
||||||
|
$(FORMATTER) 00_example_template/$(SRC)
|
||||||
|
$(FORMATTER) 01_one_sample/$(SRC)
|
||||||
|
$(FORMATTER) 02_time_to_botec/$(SRC)
|
||||||
|
$(FORMATTER) 03_gcc_nested_function/$(SRC)
|
||||||
|
$(FORMATTER) 04_gamma_beta/$(SRC)
|
||||||
|
$(FORMATTER) 05_hundred_lognormals/$(SRC)
|
||||||
|
|
||||||
|
run-all:
|
||||||
|
00_example_template/$(OUTPUT)
|
||||||
|
01_one_sample/$(OUTPUT)
|
||||||
|
02_time_to_botec/$(OUTPUT)
|
||||||
|
03_gcc_nested_function/$(OUTPUT)
|
||||||
|
04_gamma_beta/$(OUTPUT)
|
||||||
|
05_hundred_lognormals/$(OUTPUT)
|
||||||
|
|
||||||
|
## make one DIR=01_one_sample
|
||||||
|
one: $(DIR)/$(SRC)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) $(DIR)/$(SRC) $(DEPS) -o $(DIR)/$(OUTPUT)
|
||||||
|
|
||||||
|
## make format-one DIR=01_one_sample
|
||||||
|
format-one: $(DIR)/$(SRC)
|
||||||
|
$(FORMATTER) $(DIR)/$(SRC)
|
||||||
|
|
||||||
|
## make run-one DIR=01_one_sample
|
||||||
|
run-one: $(DIR)/$(OUTPUT)
|
||||||
|
$(DIR)/$(OUTPUT) && echo
|
||||||
|
|
||||||
|
## make time-linux-one DIR=01_one_sample
|
||||||
|
time-linux-one: $(DIR)/$(OUTPUT)
|
||||||
|
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
||||||
|
@echo "Running 100x and taking avg time $(DIR)/$(OUTPUT)"
|
||||||
|
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(DIR)/$(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
|
||||||
|
|
||||||
|
## e.g., make profile-linux-one DIR=01_one_sample
|
||||||
|
profile-linux-one:
|
||||||
|
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
||||||
|
echo "Must be run as sudo"
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) $(DIR)/$(SRC) $(DEPS) -o $(DIR)/$(OUTPUT)
|
||||||
|
# $(CC) $(SRC) $(DEPS) -o $(OUTPUT)
|
||||||
|
sudo perf record $(DIR)/$(OUTPUT)
|
||||||
|
sudo perf report
|
||||||
|
rm perf.data
|
BIN
examples/more/00_example_template/example
Executable file
BIN
examples/more/00_example_template/example
Executable file
Binary file not shown.
16
examples/more/00_example_template/example.c
Normal file
16
examples/more/00_example_template/example.c
Normal file
|
@ -0,0 +1,16 @@
|
||||||
|
#include "../../../squiggle.h"
|
||||||
|
#include "../../../squiggle_more.h"
|
||||||
|
#include <stdint.h>
|
||||||
|
#include <stdio.h>
|
||||||
|
#include <stdlib.h>
|
||||||
|
|
||||||
|
int main()
|
||||||
|
{
|
||||||
|
// set randomness seed
|
||||||
|
uint64_t* seed = malloc(sizeof(uint64_t));
|
||||||
|
*seed = 1000; // xorshift can't start with 0
|
||||||
|
|
||||||
|
// ...
|
||||||
|
|
||||||
|
free(seed);
|
||||||
|
}
|
BIN
examples/more/01_sample_from_cdf/example
Executable file
BIN
examples/more/01_sample_from_cdf/example
Executable file
Binary file not shown.
|
@ -1,5 +1,5 @@
|
||||||
#include "../../squiggle.h"
|
#include "../../../squiggle.h"
|
||||||
#include "../../squiggle_more.h"
|
#include "../../../squiggle_more.h"
|
||||||
#include <math.h>
|
#include <math.h>
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
BIN
examples/more/02_sample_from_cdf_beta/example
Executable file
BIN
examples/more/02_sample_from_cdf_beta/example
Executable file
Binary file not shown.
|
@ -1,5 +1,5 @@
|
||||||
#include "../../squiggle.h"
|
#include "../../../squiggle.h"
|
||||||
#include "../../squiggle_more.h"
|
#include "../../../squiggle_more.h"
|
||||||
#include <math.h>
|
#include <math.h>
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
BIN
examples/more/03_ci_beta/example
Executable file
BIN
examples/more/03_ci_beta/example
Executable file
Binary file not shown.
|
@ -1,5 +1,5 @@
|
||||||
#include "../../squiggle.h"
|
#include "../../../squiggle.h"
|
||||||
#include "../../squiggle_more.h"
|
#include "../../../squiggle_more.h"
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
||||||
#include <stdlib.h>
|
#include <stdlib.h>
|
BIN
examples/more/04_nuclear_war/example
Executable file
BIN
examples/more/04_nuclear_war/example
Executable file
Binary file not shown.
|
@ -1,5 +1,5 @@
|
||||||
#include "../../squiggle.h"
|
#include "../../../squiggle.h"
|
||||||
#include "../../squiggle_more.h"
|
#include "../../../squiggle_more.h"
|
||||||
#include <math.h>
|
#include <math.h>
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
BIN
examples/more/05_burn_10kg_fat/example
Executable file
BIN
examples/more/05_burn_10kg_fat/example
Executable file
Binary file not shown.
|
@ -1,5 +1,5 @@
|
||||||
#include "../../squiggle.h"
|
#include "../../../squiggle.h"
|
||||||
#include "../../squiggle_more.h"
|
#include "../../../squiggle_more.h"
|
||||||
#include <math.h>
|
#include <math.h>
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
BIN
examples/more/06_nuclear_recovery/example
Executable file
BIN
examples/more/06_nuclear_recovery/example
Executable file
Binary file not shown.
|
@ -1,5 +1,5 @@
|
||||||
#include "../../squiggle.h"
|
#include "../../../squiggle.h"
|
||||||
#include "../../squiggle_more.h"
|
#include "../../../squiggle_more.h"
|
||||||
#include <math.h>
|
#include <math.h>
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
BIN
examples/more/07_algebra/example
Executable file
BIN
examples/more/07_algebra/example
Executable file
Binary file not shown.
|
@ -1,5 +1,5 @@
|
||||||
#include "../../squiggle.h"
|
#include "../../../squiggle.h"
|
||||||
#include "../../squiggle_more.h"
|
#include "../../../squiggle_more.h"
|
||||||
#include <math.h>
|
#include <math.h>
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
BIN
examples/more/08_algebra_and_conversion/example
Executable file
BIN
examples/more/08_algebra_and_conversion/example
Executable file
Binary file not shown.
|
@ -1,5 +1,5 @@
|
||||||
#include "../../squiggle.h"
|
#include "../../../squiggle.h"
|
||||||
#include "../../squiggle_more.h"
|
#include "../../../squiggle_more.h"
|
||||||
#include <math.h>
|
#include <math.h>
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
BIN
examples/more/09_ergonomic_algebra/example
Executable file
BIN
examples/more/09_ergonomic_algebra/example
Executable file
Binary file not shown.
|
@ -1,5 +1,5 @@
|
||||||
#include "../../squiggle.h"
|
#include "../../../squiggle.h"
|
||||||
#include "../../squiggle_more.h"
|
#include "../../../squiggle_more.h"
|
||||||
#include <math.h>
|
#include <math.h>
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
BIN
examples/more/10_twitter_thread_example/example
Executable file
BIN
examples/more/10_twitter_thread_example/example
Executable file
Binary file not shown.
|
@ -1,5 +1,5 @@
|
||||||
#include "../../squiggle.h"
|
#include "../../../squiggle.h"
|
||||||
#include "../../squiggle_more.h"
|
#include "../../../squiggle_more.h"
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
||||||
#include <stdlib.h>
|
#include <stdlib.h>
|
BIN
examples/more/11_billion_lognormals_paralell/example
Executable file
BIN
examples/more/11_billion_lognormals_paralell/example
Executable file
Binary file not shown.
30
examples/more/11_billion_lognormals_paralell/example.c
Normal file
30
examples/more/11_billion_lognormals_paralell/example.c
Normal file
|
@ -0,0 +1,30 @@
|
||||||
|
#include "../../../squiggle.h"
|
||||||
|
#include "../../../squiggle_more.h"
|
||||||
|
#include <stdint.h>
|
||||||
|
#include <stdio.h>
|
||||||
|
#include <stdlib.h>
|
||||||
|
|
||||||
|
// Estimate functions
|
||||||
|
int main()
|
||||||
|
{
|
||||||
|
// set randomness seed
|
||||||
|
// uint64_t* seed = malloc(sizeof(uint64_t));
|
||||||
|
// *seed = 1000; // xorshift can't start with 0
|
||||||
|
// ^ not necessary, because parallel_sampler takes care of the seed.
|
||||||
|
|
||||||
|
int n_samples = 1000 * 1000 * 1000;
|
||||||
|
int n_threads = 16;
|
||||||
|
double sampler(uint64_t* seed){
|
||||||
|
return sample_lognormal(0, 10, seed);
|
||||||
|
}
|
||||||
|
double* results = malloc(n_samples * sizeof(double));
|
||||||
|
|
||||||
|
parallel_sampler(sampler, results, n_threads, n_samples);
|
||||||
|
double avg = array_sum(results, n_samples)/n_samples;
|
||||||
|
printf("Average of 1B lognormal(0,10): %f", avg);
|
||||||
|
|
||||||
|
free(results);
|
||||||
|
|
||||||
|
// free(seed);
|
||||||
|
// ^ not necessary, because parallel_sampler takes care of the seed.
|
||||||
|
}
|
BIN
examples/more/12_time_to_botec_parallel/example
Executable file
BIN
examples/more/12_time_to_botec_parallel/example
Executable file
Binary file not shown.
29
examples/more/12_time_to_botec_parallel/example.c
Normal file
29
examples/more/12_time_to_botec_parallel/example.c
Normal file
|
@ -0,0 +1,29 @@
|
||||||
|
#include "../../../squiggle.h"
|
||||||
|
#include "../../../squiggle_more.h"
|
||||||
|
#include <stdio.h>
|
||||||
|
#include <stdlib.h>
|
||||||
|
|
||||||
|
int main()
|
||||||
|
{
|
||||||
|
double p_a = 0.8;
|
||||||
|
double p_b = 0.5;
|
||||||
|
double p_c = p_a * p_b;
|
||||||
|
|
||||||
|
double sample_0(uint64_t* seed){ return 0; }
|
||||||
|
double sample_1(uint64_t* seed) { return 1; }
|
||||||
|
double sample_few(uint64_t* seed) { return sample_to(1, 3, seed); }
|
||||||
|
double sample_many(uint64_t* seed) { return sample_to(2, 10, seed); }
|
||||||
|
|
||||||
|
int n_dists = 4;
|
||||||
|
double weights[] = { 1 - p_c, p_c / 2, p_c / 4, p_c / 4 };
|
||||||
|
double (*samplers[])(uint64_t*) = { sample_0, sample_1, sample_few, sample_many };
|
||||||
|
double sampler_result(uint64_t* seed) {
|
||||||
|
return sample_mixture(samplers, weights, n_dists, seed);
|
||||||
|
}
|
||||||
|
|
||||||
|
int n_samples = 1000 * 1000, n_threads = 16;
|
||||||
|
double* results = malloc(n_samples * sizeof(double));
|
||||||
|
parallel_sampler(sampler_result, results, n_threads, n_samples);
|
||||||
|
printf("Avg: %f", array_sum(results, n_samples)/n_samples);
|
||||||
|
free(results);
|
||||||
|
}
|
108
examples/more/makefile
Normal file
108
examples/more/makefile
Normal file
|
@ -0,0 +1,108 @@
|
||||||
|
# Interface:
|
||||||
|
# make all
|
||||||
|
# make format-all
|
||||||
|
# make run-all
|
||||||
|
# make one DIR=06_nuclear_recovery
|
||||||
|
# make format-one DIR=06_nuclear_recovery
|
||||||
|
# make run-one DIR=06_nuclear_recovery
|
||||||
|
# make time-linux-one DIR=06_nuclear_recovery
|
||||||
|
# make profile-one DIR=06_nuclear_recovery
|
||||||
|
|
||||||
|
# Compiler
|
||||||
|
CC=gcc
|
||||||
|
# CC=tcc # <= faster compilation
|
||||||
|
|
||||||
|
# Main file
|
||||||
|
SRC=example.c
|
||||||
|
OUTPUT=example
|
||||||
|
|
||||||
|
## Dependencies
|
||||||
|
SQUIGGLE=../../squiggle.c
|
||||||
|
SQUIGGLE_MORE=../../squiggle_more.c
|
||||||
|
MATH=-lm
|
||||||
|
OPENMP=-fopenmp
|
||||||
|
DEPS=$(SQUIGGLE) $(SQUIGGLE_MORE) $(MATH) $(OPENMP)
|
||||||
|
|
||||||
|
## Flags
|
||||||
|
DEBUG= #'-g'
|
||||||
|
STANDARD=-std=c99
|
||||||
|
WARNINGS=-Wall
|
||||||
|
OPTIMIZED=-O3 #-Ofast
|
||||||
|
|
||||||
|
## Formatter
|
||||||
|
STYLE_BLUEPRINT=webkit
|
||||||
|
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
||||||
|
|
||||||
|
## make all
|
||||||
|
all:
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 00_example_template/$(SRC) $(DEPS) -o 00_example_template/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 01_sample_from_cdf/$(SRC) $(DEPS) -o 01_sample_from_cdf/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 02_sample_from_cdf_beta/$(SRC) $(DEPS) -o 02_sample_from_cdf_beta/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 03_ci_beta/$(SRC) $(DEPS) -o 03_ci_beta/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 04_nuclear_war/$(SRC) $(DEPS) -o 04_nuclear_war/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 05_burn_10kg_fat/$(SRC) $(DEPS) -o 05_burn_10kg_fat/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 06_nuclear_recovery/$(SRC) $(DEPS) -o 06_nuclear_recovery/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 07_algebra/$(SRC) $(DEPS) -o 07_algebra/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 08_algebra_and_conversion/$(SRC) $(DEPS) -o 08_algebra_and_conversion/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 09_ergonomic_algebra/$(SRC) $(DEPS) -o 09_ergonomic_algebra/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 10_twitter_thread_example/$(SRC) $(DEPS) -o 10_twitter_thread_example/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 11_billion_lognormals_paralell/$(SRC) $(DEPS) -o 11_billion_lognormals_paralell/$(OUTPUT)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) 12_time_to_botec_parallel/$(SRC) $(DEPS) -o 12_time_to_botec_parallel/$(OUTPUT)
|
||||||
|
|
||||||
|
format-all:
|
||||||
|
$(FORMATTER) 00_example_template/$(SRC)
|
||||||
|
$(FORMATTER) 01_sample_from_cdf/$(SRC)
|
||||||
|
$(FORMATTER) 02_sample_from_cdf_beta/$(SRC)
|
||||||
|
$(FORMATTER) 03_ci_beta/$(SRC)
|
||||||
|
$(FORMATTER) 04_nuclear_war/$(SRC)
|
||||||
|
$(FORMATTER) 05_burn_10kg_fat/$(SRC)
|
||||||
|
$(FORMATTER) 06_nuclear_recovery/$(SRC)
|
||||||
|
$(FORMATTER) 07_algebra/$(SRC)
|
||||||
|
$(FORMATTER) 08_algebra_and_conversion/$(SRC)
|
||||||
|
$(FORMATTER) 09_ergonomic_algebra/$(SRC)
|
||||||
|
$(FORMATTER) 10_twitter_thread_example/$(SRC)
|
||||||
|
$(FORMATTER) 11_billion_lognormals_paralell/$(SRC)
|
||||||
|
$(FORMATTER) 12_time_to_botec_parallel/$(SRC)
|
||||||
|
|
||||||
|
run-all:
|
||||||
|
00_example_template/$(OUTPUT)
|
||||||
|
01_sample_from_cdf/$(OUTPUT)
|
||||||
|
02_sample_from_cdf_beta/$(OUTPUT)
|
||||||
|
03_ci_beta/$(OUTPUT)
|
||||||
|
04_nuclear_war/$(OUTPUT)
|
||||||
|
05_burn_10kg_fat/$(OUTPUT)
|
||||||
|
06_nuclear_recovery/$(OUTPUT)
|
||||||
|
07_algebra/$(OUTPUT)
|
||||||
|
08_algebra_and_conversion/$(OUTPUT)
|
||||||
|
09_ergonomic_algebra/$(OUTPUT)
|
||||||
|
10_twitter_thread_example/$(OUTPUT)
|
||||||
|
11_billion_lognormals_paralell/$(OUTPUT)
|
||||||
|
12_time_to_botec_parallel/$(OUTPUT)
|
||||||
|
|
||||||
|
## make one DIR=06_nuclear_recovery
|
||||||
|
one: $(DIR)/$(SRC)
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) $(DIR)/$(SRC) $(DEPS) -o $(DIR)/$(OUTPUT)
|
||||||
|
|
||||||
|
## make format-one DIR=06_nuclear_recovery
|
||||||
|
format-one: $(DIR)/$(SRC)
|
||||||
|
$(FORMATTER) $(DIR)/$(SRC)
|
||||||
|
|
||||||
|
## make run-one DIR=06_nuclear_recovery
|
||||||
|
run-one: $(DIR)/$(OUTPUT)
|
||||||
|
$(DIR)/$(OUTPUT) && echo
|
||||||
|
|
||||||
|
## make time-linux-one DIR=06_nuclear_recovery
|
||||||
|
time-linux-one: $(DIR)/$(OUTPUT)
|
||||||
|
@echo "Requires /bin/time, found on GNU/Linux systems" && echo
|
||||||
|
@echo "Running 100x and taking avg time $(DIR)/$(OUTPUT)"
|
||||||
|
@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(DIR)/$(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time: |" | sed 's|$$|ms|' && echo
|
||||||
|
|
||||||
|
## e.g., make profile-linux-one DIR=06_nuclear_recovery
|
||||||
|
profile-linux-one:
|
||||||
|
echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
|
||||||
|
echo "Must be run as sudo"
|
||||||
|
$(CC) $(OPTIMIZED) $(DEBUG) $(DIR)/$(SRC) $(DEPS) -o $(DIR)/$(OUTPUT)
|
||||||
|
# $(CC) $(SRC) $(DEPS) -o $(OUTPUT)
|
||||||
|
sudo perf record $(DIR)/$(OUTPUT)
|
||||||
|
sudo perf report
|
||||||
|
rm perf.data
|
36
makefile
36
makefile
|
@ -5,40 +5,12 @@ STYLE_BLUEPRINT=webkit
|
||||||
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
|
||||||
|
|
||||||
build-examples:
|
build-examples:
|
||||||
cd examples/01_one_sample && make && echo
|
cd examples/core && make all
|
||||||
cd examples/02_many_samples_time_to_botec && make && echo
|
cd examples/more && make all
|
||||||
cd examples/03_gcc_nested_function && make && echo
|
|
||||||
cd examples/04_sample_from_cdf_simple && make && echo
|
|
||||||
cd examples/05_sample_from_cdf_beta && make && echo
|
|
||||||
cd examples/06_gamma_beta && make && echo
|
|
||||||
cd examples/07_ci_beta && make && echo
|
|
||||||
cd examples/08_nuclear_war && make && echo
|
|
||||||
cd examples/09_burn_10kg_fat && make && echo
|
|
||||||
cd examples/10_nuclear_recovery && make && echo
|
|
||||||
cd examples/11_algebra && make && echo
|
|
||||||
cd examples/12_algebra_and_conversion && make && echo
|
|
||||||
cd examples/13_ergonomic_algebra && make && echo
|
|
||||||
cd examples/14_twitter_thread_example && make && echo
|
|
||||||
cd examples/15_plotting-scratchpad && make && echo
|
|
||||||
cd examples/16_100_lognormal_samples && make && echo
|
|
||||||
|
|
||||||
format-examples:
|
format-examples:
|
||||||
cd examples/01_one_sample && make format && echo
|
cd examples/core && make format-all
|
||||||
cd examples/02_many_samples_time_to_botec && make format && echo
|
cd examples/more && make format-all
|
||||||
cd examples/03_gcc_nested_function && make format && echo
|
|
||||||
cd examples/04_sample_from_cdf_simple && make format && echo
|
|
||||||
cd examples/05_sample_from_cdf_beta && make format && echo
|
|
||||||
cd examples/06_gamma_beta && make format && echo
|
|
||||||
cd examples/07_ci_beta && make format && echo
|
|
||||||
cd examples/08_nuclear_war && make format && echo
|
|
||||||
cd examples/09_burn_10kg_fat && make format && echo
|
|
||||||
cd examples/10_nuclear_recovery && make format && echo
|
|
||||||
cd examples/11_algebra && make format && echo
|
|
||||||
cd examples/12_algebra_and_conversion && make format && echo
|
|
||||||
cd examples/13_ergonomic_algebra && make format && echo
|
|
||||||
cd examples/14_twitter_thread_example && make format && echo
|
|
||||||
cd examples/15_plotting-scratchpad && make format && echo
|
|
||||||
cd examples/16_100_lognormal_samples && make format && echo
|
|
||||||
|
|
||||||
format: squiggle.c squiggle.h
|
format: squiggle.c squiggle.h
|
||||||
$(FORMATTER) squiggle.c
|
$(FORMATTER) squiggle.c
|
||||||
|
|
|
@ -7,20 +7,20 @@
|
||||||
#include <stdlib.h>
|
#include <stdlib.h>
|
||||||
#include "squiggle.h"
|
#include "squiggle.h"
|
||||||
|
|
||||||
// math constants
|
/* Math constants */
|
||||||
#define PI 3.14159265358979323846 // M_PI in gcc gnu99
|
#define PI 3.14159265358979323846 // M_PI in gcc gnu99
|
||||||
#define NORMAL90CONFIDENCE 1.6448536269514727
|
#define NORMAL90CONFIDENCE 1.6448536269514727
|
||||||
|
|
||||||
// Some error niceties; these won't be used until later
|
/* Some error niceties */
|
||||||
|
// These won't be used until later
|
||||||
#define MAX_ERROR_LENGTH 500
|
#define MAX_ERROR_LENGTH 500
|
||||||
#define EXIT_ON_ERROR 0
|
#define EXIT_ON_ERROR 0
|
||||||
#define PROCESS_ERROR(error_msg) process_error(error_msg, EXIT_ON_ERROR, __FILE__, __LINE__)
|
#define PROCESS_ERROR(error_msg) process_error(error_msg, EXIT_ON_ERROR, __FILE__, __LINE__)
|
||||||
|
|
||||||
// Get confidence intervals, given a sampler
|
/* Get confidence intervals, given a sampler */
|
||||||
// Not in core yet because I'm not sure how much I like the struct
|
// Not in core yet because I'm not sure how much I like the struct
|
||||||
// and the built-in 100k samples
|
// and the built-in 100k samples
|
||||||
// to do: add n to function parameters and document
|
// to do: add n to function parameters and document
|
||||||
|
|
||||||
typedef struct ci_t {
|
typedef struct ci_t {
|
||||||
float low;
|
float low;
|
||||||
float high;
|
float high;
|
||||||
|
@ -58,7 +58,10 @@ ci get_90_confidence_interval(double (*sampler)(uint64_t*), uint64_t* seed)
|
||||||
return result;
|
return result;
|
||||||
}
|
}
|
||||||
|
|
||||||
// ## Sample from an arbitrary cdf
|
/* Scaffolding to handle errors */
|
||||||
|
// We are building towards sample from an arbitrary cdf
|
||||||
|
// and that operation might fail
|
||||||
|
// so we build some scaffolding here
|
||||||
struct box {
|
struct box {
|
||||||
int empty;
|
int empty;
|
||||||
double content;
|
double content;
|
||||||
|
@ -78,13 +81,9 @@ struct box process_error(const char* error_msg, int should_exit, char* file, int
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
// Inverse cdf at point
|
/* Invert an arbitrary cdf at a point */
|
||||||
// Two versions of this function:
|
// Version #1:
|
||||||
// - raw, dealing with cdfs that return doubles
|
// - input: (cdf: double => double, p)
|
||||||
// - input: cdf: double => double, p
|
|
||||||
// - output: Box(number|error)
|
|
||||||
// - box, dealing with cdfs that return a box.
|
|
||||||
// - input: cdf: double => Box(number|error), p
|
|
||||||
// - output: Box(number|error)
|
// - output: Box(number|error)
|
||||||
struct box inverse_cdf_double(double cdf(double), double p)
|
struct box inverse_cdf_double(double cdf(double), double p)
|
||||||
{
|
{
|
||||||
|
@ -149,6 +148,9 @@ struct box inverse_cdf_double(double cdf(double), double p)
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
|
// Version #2:
|
||||||
|
// - input: (cdf: double => Box(number|error), p)
|
||||||
|
// - output: Box(number|error)
|
||||||
struct box inverse_cdf_box(struct box cdf_box(double), double p)
|
struct box inverse_cdf_box(struct box cdf_box(double), double p)
|
||||||
{
|
{
|
||||||
// given a cdf: [-Inf, Inf] => Box([0,1])
|
// given a cdf: [-Inf, Inf] => Box([0,1])
|
||||||
|
@ -225,7 +227,9 @@ struct box inverse_cdf_box(struct box cdf_box(double), double p)
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
|
|
||||||
// Sampler based on inverse cdf and randomness function
|
/* Sample from an arbitrary cdf */
|
||||||
|
// Before: invert an arbitrary cdf at a point
|
||||||
|
// Now: from an arbitrary cdf, get a sample
|
||||||
struct box sampler_cdf_box(struct box cdf(double), uint64_t* seed)
|
struct box sampler_cdf_box(struct box cdf(double), uint64_t* seed)
|
||||||
{
|
{
|
||||||
double p = sample_unit_uniform(seed);
|
double p = sample_unit_uniform(seed);
|
||||||
|
@ -238,9 +242,7 @@ struct box sampler_cdf_double(double cdf(double), uint64_t* seed)
|
||||||
struct box result = inverse_cdf_double(cdf, p);
|
struct box result = inverse_cdf_double(cdf, p);
|
||||||
return result;
|
return result;
|
||||||
}
|
}
|
||||||
|
double sampler_cdf_danger(struct box cdf(double), uint64_t* seed)
|
||||||
/* Could also define other variations, e.g.,
|
|
||||||
double sampler_danger(struct box cdf(double), uint64_t* seed)
|
|
||||||
{
|
{
|
||||||
double p = sample_unit_uniform(seed);
|
double p = sample_unit_uniform(seed);
|
||||||
struct box result = inverse_cdf_box(cdf, p);
|
struct box result = inverse_cdf_box(cdf, p);
|
||||||
|
@ -250,10 +252,8 @@ double sampler_danger(struct box cdf(double), uint64_t* seed)
|
||||||
return result.content;
|
return result.content;
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
*/
|
|
||||||
|
|
||||||
// # Small algebra manipulations
|
|
||||||
|
|
||||||
|
/* Algebra manipulations */
|
||||||
// here I discover named structs,
|
// here I discover named structs,
|
||||||
// which mean that I don't have to be typing
|
// which mean that I don't have to be typing
|
||||||
// struct blah all the time.
|
// struct blah all the time.
|
||||||
|
@ -304,9 +304,8 @@ ci convert_lognormal_params_to_ci(lognormal_params y)
|
||||||
return result;
|
return result;
|
||||||
}
|
}
|
||||||
|
|
||||||
// Paralellism
|
/* Parallel sampler */
|
||||||
/*
|
void parallel_sampler(double (*sampler)(uint64_t* seed), double* results, int n_threads, int n_samples){
|
||||||
void paralellize(float (*sampler)(uint64_t* seed), float* results, int n_threads, int n_samples){
|
|
||||||
if((n_samples % n_threads) != 0){
|
if((n_samples % n_threads) != 0){
|
||||||
fprintf(stderr, "Number of samples isn't divisible by number of threads, aborting\n");
|
fprintf(stderr, "Number of samples isn't divisible by number of threads, aborting\n");
|
||||||
exit(1);
|
exit(1);
|
||||||
|
@ -336,4 +335,3 @@ void paralellize(float (*sampler)(uint64_t* seed), float* results, int n_threads
|
||||||
}
|
}
|
||||||
free(seeds);
|
free(seeds);
|
||||||
}
|
}
|
||||||
*/
|
|
||||||
|
|
|
@ -46,4 +46,6 @@ lognormal_params algebra_product_lognormals(lognormal_params a, lognormal_params
|
||||||
lognormal_params convert_ci_to_lognormal_params(ci x);
|
lognormal_params convert_ci_to_lognormal_params(ci x);
|
||||||
ci convert_lognormal_params_to_ci(lognormal_params y);
|
ci convert_lognormal_params_to_ci(lognormal_params y);
|
||||||
|
|
||||||
|
void parallel_sampler(double (*sampler)(uint64_t* seed), double* results, int n_threads, int n_samples);
|
||||||
|
|
||||||
#endif
|
#endif
|
||||||
|
|
Loading…
Reference in New Issue
Block a user