test correlated/uncorrelated example code.
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README.md
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README.md
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# Squiggle.c
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A self-contained C99 library that provides a subset of [Squiggle](https://www.squiggle-language.com/)'s functionality in C. It should be fast, but at the margin, simplicity of implementation wins over speed.
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A self-contained C99 library that provides a subset of [Squiggle](https://www.squiggle-language.com/)'s functionality in C.
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## Why C?
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@ -70,6 +70,82 @@ The first approach produces terser programs but might not scale. The second appr
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Behaviour on error can be toggled by the `EXIT_ON_ERROR` variable. This library also provides a convenient macro, `PROCESS_ERROR`, to make error handling in either case much terser—see the usage in example 4 in the examples/ folder.
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## Design choices
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This code should aim to be fast, but at the margin, simplicity of implementation wins over speed. For example, there are various possible algorithms to sample a distribution, one of which is faster in part of the domain, I'm choosing to only have one algorithm and pay the—normally small—performance penalty.
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## Correlated samples
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In the parent [squiggle](https://www.squiggle-language.com/) language, there is some ambiguity about what this code means:
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```
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a = 1 to 10
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b = 2 * a
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c = b/a
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c
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```
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Should `c` be equal to `2`? or should it be equal to 2 times the expected ratio of two independent draws from a (`2 * a/a`, as it were)?
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In squiggle.c, this ambiguity doesn't exist, at the cost of greater verbosity:
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```c
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// correlated samples
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// gcc -O3 correlated.c squiggle.c -lm -o correlated
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#include "squiggle.h"
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#include <stdint.h>
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#include <stdlib.h>
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#include <stdio.h>
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int main(){
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// set randomness seed
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uint32_t* seed = malloc(sizeof(uint32_t));
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*seed = 1000; // xorshift can't start with a seed of 0
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float a = sample_to(1, 10, seed);
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float b = 2 * a;
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float c = b / a;
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printf("a: %f, b: %f, c: %f\n", a, b, c);
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// a: 0.607162, b: 1.214325, c: 0.500000
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free(seed);
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}
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```
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vs
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```c
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// uncorrelated samples
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// gcc -O3 uncorrelated.c ../../squiggle.c -lm -o uncorrelated
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#include "squiggle.h"
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#include <stdint.h>
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#include <stdlib.h>
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#include <stdio.h>
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float draw_xyz(uint32_t* seed){
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// function could also be placed inside main with gcc nested functions extension.
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return sample_to(1, 20, seed);
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}
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int main(){
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// set randomness seed
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uint32_t* seed = malloc(sizeof(uint32_t));
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*seed = 1000; // xorshift can't start with a seed of 0
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float a = draw_xyz(seed);
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float b = 2 * draw_xyz(seed);
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float c = b / a;
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printf("a: %f, b: %f, c: %f\n", a, b, c);
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// a: 0.522484, b: 10.283501, c: 19.681936
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free(seed)
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}
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```
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## Related projects
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- [Squiggle](https://www.squiggle-language.com/)
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BIN
scratchpad/correlated/correlated
Executable file
BIN
scratchpad/correlated/correlated
Executable file
Binary file not shown.
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scratchpad/correlated/correlated.c
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scratchpad/correlated/correlated.c
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// correlated samples
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#include "../../squiggle.h"
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#include <stdint.h>
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#include <stdio.h>
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#include <stdlib.h>
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int main()
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{
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// set randomness seed
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uint32_t* seed = malloc(sizeof(uint32_t));
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*seed = 1000; // xorshift can't start with 0
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float a = sample_to(1, 10, seed);
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float b = 2 * a;
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float c = a / b;
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printf("a: %f, b: %f, c: %f\n", a, b, c);
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free(seed);
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}
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scratchpad/correlated/makefile
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scratchpad/correlated/makefile
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# Interface:
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# make
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# make build
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# make format
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# make run
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# Compiler
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CC=gcc
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# CC=tcc # <= faster compilation
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# Main file
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SRC=correlated.c ../../squiggle.c
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OUTPUT=correlated
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## Dependencies
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MATH=-lm
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## Flags
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DEBUG= #'-g'
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STANDARD=-std=c99
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WARNINGS=-Wall
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OPTIMIZED=-O3 #-Ofast
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# OPENMP=-fopenmp
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## Formatter
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STYLE_BLUEPRINT=webkit
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FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
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## make build
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build: $(SRC)
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$(CC) $(OPTIMIZED) $(DEBUG) $(SRC) $(MATH) -o $(OUTPUT)
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format: $(SRC)
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$(FORMATTER) $(SRC)
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run: $(SRC) $(OUTPUT)
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OMP_NUM_THREADS=1 ./$(OUTPUT) && echo
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time-linux:
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@echo "Requires /bin/time, found on GNU/Linux systems" && echo
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@echo "Running 100x and taking avg time $(OUTPUT)"
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@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
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## Profiling
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profile-linux:
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echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
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echo "Must be run as sudo"
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$(CC) $(SRC) $(MATH) -o $(OUTPUT)
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sudo perf record ./$(OUTPUT)
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sudo perf report
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rm perf.data
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53
scratchpad/uncorrelated/makefile
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scratchpad/uncorrelated/makefile
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# Interface:
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# make
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# make build
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# make format
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# make run
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# Compiler
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CC=gcc
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# CC=tcc # <= faster compilation
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# Main file
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SRC=uncorrelated.c ../../squiggle.c
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OUTPUT=uncorrelated
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## Dependencies
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MATH=-lm
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## Flags
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DEBUG= #'-g'
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STANDARD=-std=c99
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WARNINGS=-Wall
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OPTIMIZED=-O3 #-Ofast
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# OPENMP=-fopenmp
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## Formatter
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STYLE_BLUEPRINT=webkit
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FORMATTER=clang-format -i -style=$(STYLE_BLUEPRINT)
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## make build
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build: $(SRC)
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$(CC) $(OPTIMIZED) $(DEBUG) $(SRC) $(MATH) -o $(OUTPUT)
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format: $(SRC)
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$(FORMATTER) $(SRC)
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run: $(SRC) $(OUTPUT)
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OMP_NUM_THREADS=1 ./$(OUTPUT) && echo
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time-linux:
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@echo "Requires /bin/time, found on GNU/Linux systems" && echo
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@echo "Running 100x and taking avg time $(OUTPUT)"
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@t=$$(/usr/bin/time -f "%e" -p bash -c 'for i in {1..100}; do $(OUTPUT); done' 2>&1 >/dev/null | grep real | awk '{print $$2}' ); echo "scale=2; 1000 * $$t / 100" | bc | sed "s|^|Time using 1 thread: |" | sed 's|$$|ms|' && echo
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## Profiling
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profile-linux:
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echo "Requires perf, which depends on the kernel version, and might be in linux-tools package or similar"
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echo "Must be run as sudo"
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$(CC) $(SRC) $(MATH) -o $(OUTPUT)
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sudo perf record ./$(OUTPUT)
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sudo perf report
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rm perf.data
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BIN
scratchpad/uncorrelated/uncorrelated
Executable file
BIN
scratchpad/uncorrelated/uncorrelated
Executable file
Binary file not shown.
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scratchpad/uncorrelated/uncorrelated.c
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scratchpad/uncorrelated/uncorrelated.c
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// uncorrelated samples
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#include "../../squiggle.h"
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#include <stdint.h>
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#include <stdlib.h>
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#include <stdio.h>
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float draw_xyz(uint32_t* seed){
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// function could also be placed inside main with gcc nested functions extension.
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return sample_to(1, 20, seed);
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}
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int main(){
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// set randomness seed
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uint32_t* seed = malloc(sizeof(uint32_t));
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*seed = 1000; // xorshift can't start with 0
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float a = draw_xyz(seed);
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float b = 2 * draw_xyz(seed);
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float c = b / a;
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printf("a: %f, b: %f, c: %f\n", a, b, c);
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}
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