tweak parallize function
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0a660ce6a5
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1521030421
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@ -15,6 +15,7 @@ int main()
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int n_dists = 4;
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int n_dists = 4;
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// These are nested functions. They will not compile without gcc.
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double sample_0(uint64_t * seed) { return 0; }
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double sample_0(uint64_t * seed) { return 0; }
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double sample_1(uint64_t * seed) { return 1; }
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double sample_1(uint64_t * seed) { return 1; }
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double sample_few(uint64_t * seed) { return sample_to(1, 3, seed); }
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double sample_few(uint64_t * seed) { return sample_to(1, 3, seed); }
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@ -7,20 +7,20 @@
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#include <stdlib.h>
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#include <stdlib.h>
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#include "squiggle.h"
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#include "squiggle.h"
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// math constants
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/* Math constants */
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#define PI 3.14159265358979323846 // M_PI in gcc gnu99
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#define PI 3.14159265358979323846 // M_PI in gcc gnu99
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#define NORMAL90CONFIDENCE 1.6448536269514727
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#define NORMAL90CONFIDENCE 1.6448536269514727
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// Some error niceties; these won't be used until later
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/* Some error niceties */
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// These won't be used until later
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#define MAX_ERROR_LENGTH 500
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#define MAX_ERROR_LENGTH 500
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#define EXIT_ON_ERROR 0
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#define EXIT_ON_ERROR 0
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#define PROCESS_ERROR(error_msg) process_error(error_msg, EXIT_ON_ERROR, __FILE__, __LINE__)
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#define PROCESS_ERROR(error_msg) process_error(error_msg, EXIT_ON_ERROR, __FILE__, __LINE__)
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// Get confidence intervals, given a sampler
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/* Get confidence intervals, given a sampler */
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// Not in core yet because I'm not sure how much I like the struct
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// Not in core yet because I'm not sure how much I like the struct
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// and the built-in 100k samples
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// and the built-in 100k samples
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// to do: add n to function parameters and document
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// to do: add n to function parameters and document
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typedef struct ci_t {
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typedef struct ci_t {
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float low;
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float low;
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float high;
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float high;
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@ -58,7 +58,10 @@ ci get_90_confidence_interval(double (*sampler)(uint64_t*), uint64_t* seed)
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return result;
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return result;
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}
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}
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// ## Sample from an arbitrary cdf
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/* Scaffolding to handle errors */
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// We are building towards sample from an arbitrary cdf
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// and that operation might fail
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// so we build some scaffolding here
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struct box {
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struct box {
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int empty;
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int empty;
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double content;
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double content;
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@ -78,14 +81,10 @@ struct box process_error(const char* error_msg, int should_exit, char* file, int
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}
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}
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}
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}
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// Inverse cdf at point
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/* Invert an arbitrary cdf at a point */
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// Two versions of this function:
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// Version #1:
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// - raw, dealing with cdfs that return doubles
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// - input: (cdf: double => double, p)
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// - input: cdf: double => double, p
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// - output: Box(number|error)
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// - output: Box(number|error)
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// - box, dealing with cdfs that return a box.
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// - input: cdf: double => Box(number|error), p
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// - output: Box(number|error)
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struct box inverse_cdf_double(double cdf(double), double p)
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struct box inverse_cdf_double(double cdf(double), double p)
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{
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{
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// given a cdf: [-Inf, Inf] => [0,1]
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// given a cdf: [-Inf, Inf] => [0,1]
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@ -149,6 +148,9 @@ struct box inverse_cdf_double(double cdf(double), double p)
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}
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}
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}
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}
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// Version #2:
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// - input: (cdf: double => Box(number|error), p)
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// - output: Box(number|error)
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struct box inverse_cdf_box(struct box cdf_box(double), double p)
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struct box inverse_cdf_box(struct box cdf_box(double), double p)
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{
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{
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// given a cdf: [-Inf, Inf] => Box([0,1])
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// given a cdf: [-Inf, Inf] => Box([0,1])
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@ -225,7 +227,9 @@ struct box inverse_cdf_box(struct box cdf_box(double), double p)
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}
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}
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}
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}
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// Sampler based on inverse cdf and randomness function
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/* Sample from an arbitrary cdf */
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// Before: invert an arbitrary cdf at a point
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// Now: from an arbitrary cdf, get a sample
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struct box sampler_cdf_box(struct box cdf(double), uint64_t* seed)
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struct box sampler_cdf_box(struct box cdf(double), uint64_t* seed)
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{
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{
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double p = sample_unit_uniform(seed);
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double p = sample_unit_uniform(seed);
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@ -238,22 +242,18 @@ struct box sampler_cdf_double(double cdf(double), uint64_t* seed)
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struct box result = inverse_cdf_double(cdf, p);
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struct box result = inverse_cdf_double(cdf, p);
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return result;
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return result;
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}
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}
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double sampler_cdf_danger(struct box cdf(double), uint64_t* seed)
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/* Could also define other variations, e.g.,
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double sampler_danger(struct box cdf(double), uint64_t* seed)
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{
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{
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double p = sample_unit_uniform(seed);
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double p = sample_unit_uniform(seed);
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struct box result = inverse_cdf_box(cdf, p);
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struct box result = inverse_cdf_box(cdf, p);
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if(result.empty){
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if(result.empty){
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exit(1);
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exit(1);
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}else{
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}else{
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return result.content;
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return result.content;
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}
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}
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}
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}
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*/
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// # Small algebra manipulations
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/* Algebra manipulations */
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// here I discover named structs,
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// here I discover named structs,
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// which mean that I don't have to be typing
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// which mean that I don't have to be typing
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// struct blah all the time.
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// struct blah all the time.
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@ -304,9 +304,8 @@ ci convert_lognormal_params_to_ci(lognormal_params y)
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return result;
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return result;
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}
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}
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// Paralellism
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/* Parallel sampler */
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/*
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void parallel_sampler(double (*sampler)(uint64_t* seed), double* results, int n_threads, int n_samples){
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void paralellize(float (*sampler)(uint64_t* seed), float* results, int n_threads, int n_samples){
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if((n_samples % n_threads) != 0){
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if((n_samples % n_threads) != 0){
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fprintf(stderr, "Number of samples isn't divisible by number of threads, aborting\n");
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fprintf(stderr, "Number of samples isn't divisible by number of threads, aborting\n");
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exit(1);
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exit(1);
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@ -336,4 +335,3 @@ void paralellize(float (*sampler)(uint64_t* seed), float* results, int n_threads
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}
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}
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free(seeds);
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free(seeds);
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}
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}
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*/
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@ -46,4 +46,6 @@ lognormal_params algebra_product_lognormals(lognormal_params a, lognormal_params
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lognormal_params convert_ci_to_lognormal_params(ci x);
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lognormal_params convert_ci_to_lognormal_params(ci x);
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ci convert_lognormal_params_to_ci(lognormal_params y);
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ci convert_lognormal_params_to_ci(lognormal_params y);
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void parallel_sampler(double (*sampler)(uint64_t* seed), double* results, int n_threads, int n_samples);
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#endif
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#endif
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