forked from personal/squiggle.c
move to xorshift64. Better precision.
This commit is contained in:
parent
11286211f7
commit
9e1d4ee6d4
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@ -128,7 +128,7 @@ In squiggle.c, this ambiguity doesn't exist, at the cost of much greater overhea
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int main(){
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int main(){
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// set randomness seed
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// set randomness seed
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uint32_t* seed = malloc(sizeof(uint32_t));
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uint64_t* seed = malloc(sizeof(uint64_t));
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*seed = 1000; // xorshift can't start with a seed of 0
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*seed = 1000; // xorshift can't start with a seed of 0
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float a = sample_to(1, 10, seed);
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float a = sample_to(1, 10, seed);
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@ -153,7 +153,7 @@ vs
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#include <stdlib.h>
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#include <stdlib.h>
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#include <stdio.h>
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#include <stdio.h>
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float draw_xyz(uint32_t* seed){
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float draw_xyz(uint64_t* seed){
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// function could also be placed inside main with gcc nested functions extension.
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// function could also be placed inside main with gcc nested functions extension.
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return sample_to(1, 20, seed);
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return sample_to(1, 20, seed);
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}
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}
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@ -161,7 +161,7 @@ float draw_xyz(uint32_t* seed){
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int main(){
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int main(){
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// set randomness seed
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// set randomness seed
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uint32_t* seed = malloc(sizeof(uint32_t));
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uint64_t* seed = malloc(sizeof(uint64_t));
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*seed = 1000; // xorshift can't start with a seed of 0
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*seed = 1000; // xorshift can't start with a seed of 0
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float a = draw_xyz(seed);
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float a = draw_xyz(seed);
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@ -4,29 +4,29 @@
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#include <stdio.h>
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#include <stdio.h>
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// Estimate functions
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// Estimate functions
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float sample_0(uint32_t* seed)
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float sample_0(uint64_t* seed)
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{
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{
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return 0;
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return 0;
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}
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}
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float sample_1(uint32_t* seed)
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float sample_1(uint64_t* seed)
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{
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{
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return 1;
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return 1;
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}
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}
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float sample_few(uint32_t* seed)
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float sample_few(uint64_t* seed)
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{
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{
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return sample_to(1, 3, seed);
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return sample_to(1, 3, seed);
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}
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}
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float sample_many(uint32_t* seed)
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float sample_many(uint64_t* seed)
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{
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{
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return sample_to(2, 10, seed);
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return sample_to(2, 10, seed);
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}
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}
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int main(){
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int main(){
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// set randomness seed
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// set randomness seed
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uint32_t* seed = malloc(sizeof(uint32_t));
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uint64_t* seed = malloc(sizeof(uint64_t));
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*seed = 1000; // xorshift can't start with 0
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*seed = 1000; // xorshift can't start with 0
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float p_a = 0.8;
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float p_a = 0.8;
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@ -35,7 +35,7 @@ int main(){
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int n_dists = 4;
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int n_dists = 4;
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float weights[] = { 1 - p_c, p_c / 2, p_c / 4, p_c / 4 };
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float weights[] = { 1 - p_c, p_c / 2, p_c / 4, p_c / 4 };
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float (*samplers[])(uint32_t*) = { sample_0, sample_1, sample_few, sample_many };
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float (*samplers[])(uint64_t*) = { sample_0, sample_1, sample_few, sample_many };
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float result_one = sample_mixture(samplers, weights, n_dists, seed);
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float result_one = sample_mixture(samplers, weights, n_dists, seed);
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printf("result_one: %f\n", result_one);
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printf("result_one: %f\n", result_one);
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Binary file not shown.
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@ -4,29 +4,29 @@
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#include "../../squiggle.h"
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#include "../../squiggle.h"
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// Estimate functions
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// Estimate functions
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float sample_0(uint32_t* seed)
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float sample_0(uint64_t* seed)
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{
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{
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return 0;
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return 0;
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}
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}
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float sample_1(uint32_t* seed)
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float sample_1(uint64_t* seed)
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{
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{
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return 1;
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return 1;
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}
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}
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float sample_few(uint32_t* seed)
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float sample_few(uint64_t* seed)
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{
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{
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return sample_to(1, 3, seed);
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return sample_to(1, 3, seed);
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}
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}
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float sample_many(uint32_t* seed)
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float sample_many(uint64_t* seed)
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{
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{
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return sample_to(2, 10, seed);
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return sample_to(2, 10, seed);
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}
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}
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int main(){
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int main(){
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// set randomness seed
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// set randomness seed
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uint32_t* seed = malloc(sizeof(uint32_t));
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uint64_t* seed = malloc(sizeof(uint64_t));
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*seed = 1000; // xorshift can't start with 0
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*seed = 1000; // xorshift can't start with 0
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float p_a = 0.8;
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float p_a = 0.8;
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@ -35,7 +35,7 @@ int main(){
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int n_dists = 4;
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int n_dists = 4;
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float weights[] = { 1 - p_c, p_c / 2, p_c / 4, p_c / 4 };
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float weights[] = { 1 - p_c, p_c / 2, p_c / 4, p_c / 4 };
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float (*samplers[])(uint32_t*) = { sample_0, sample_1, sample_few, sample_many };
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float (*samplers[])(uint64_t*) = { sample_0, sample_1, sample_few, sample_many };
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int n_samples = 1000000;
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int n_samples = 1000000;
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float* result_many = (float *) malloc(n_samples * sizeof(float));
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float* result_many = (float *) malloc(n_samples * sizeof(float));
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Binary file not shown.
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@ -5,7 +5,7 @@
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int main(){
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int main(){
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// set randomness seed
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// set randomness seed
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uint32_t* seed = malloc(sizeof(uint32_t));
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uint64_t* seed = malloc(sizeof(uint64_t));
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*seed = 1000; // xorshift can't start with 0
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*seed = 1000; // xorshift can't start with 0
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float p_a = 0.8;
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float p_a = 0.8;
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@ -14,12 +14,12 @@ int main(){
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int n_dists = 4;
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int n_dists = 4;
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float sample_0(uint32_t* seed){ return 0; }
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float sample_0(uint64_t* seed){ return 0; }
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float sample_1(uint32_t* seed) { return 1; }
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float sample_1(uint64_t* seed) { return 1; }
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float sample_few(uint32_t* seed){ return sample_to(1, 3, seed); }
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float sample_few(uint64_t* seed){ return sample_to(1, 3, seed); }
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float sample_many(uint32_t* seed){ return sample_to(2, 10, seed); }
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float sample_many(uint64_t* seed){ return sample_to(2, 10, seed); }
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float (*samplers[])(uint32_t*) = { sample_0, sample_1, sample_few, sample_many };
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float (*samplers[])(uint64_t*) = { sample_0, sample_1, sample_few, sample_many };
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float weights[] = { 1 - p_c, p_c / 2, p_c / 4, p_c / 4 };
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float weights[] = { 1 - p_c, p_c / 2, p_c / 4, p_c / 4 };
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int n_samples = 1000000;
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int n_samples = 1000000;
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Binary file not shown.
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@ -49,7 +49,7 @@ void test_inverse_cdf_float(char* cdf_name, float cdf_float(float))
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}
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}
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}
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}
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void test_and_time_sampler_float(char* cdf_name, float cdf_float(float), uint32_t* seed)
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void test_and_time_sampler_float(char* cdf_name, float cdf_float(float), uint64_t* seed)
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{
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{
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printf("\nGetting some samples from %s:\n", cdf_name);
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printf("\nGetting some samples from %s:\n", cdf_name);
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clock_t begin = clock();
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clock_t begin = clock();
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@ -75,7 +75,7 @@ int main()
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// Testing samplers
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// Testing samplers
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// set randomness seed
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// set randomness seed
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uint32_t* seed = malloc(sizeof(uint32_t));
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uint64_t* seed = malloc(sizeof(uint64_t));
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*seed = 1000; // xorshift can't start with 0
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*seed = 1000; // xorshift can't start with 0
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// Test float sampler
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// Test float sampler
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@ -131,7 +131,7 @@ void test_inverse_cdf_box(char* cdf_name, struct box cdf_box(float))
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}
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}
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}
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}
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void test_and_time_sampler_box(char* cdf_name, struct box cdf_box(float), uint32_t* seed)
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void test_and_time_sampler_box(char* cdf_name, struct box cdf_box(float), uint64_t* seed)
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{
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{
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printf("\nGetting some samples from %s:\n", cdf_name);
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printf("\nGetting some samples from %s:\n", cdf_name);
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clock_t begin = clock();
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clock_t begin = clock();
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test_inverse_cdf_box("cdf_beta", cdf_beta);
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test_inverse_cdf_box("cdf_beta", cdf_beta);
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// Test box sampler
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// Test box sampler
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uint32_t* seed = malloc(sizeof(uint32_t));
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uint64_t* seed = malloc(sizeof(uint64_t));
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*seed = 1000; // xorshift can't start with 0
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*seed = 1000; // xorshift can't start with 0
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test_and_time_sampler_box("cdf_beta", cdf_beta, seed);
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test_and_time_sampler_box("cdf_beta", cdf_beta, seed);
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// Ok, this is slower than python!!
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// Ok, this is slower than python!!
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Binary file not shown.
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int main()
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int main()
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{
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{
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// set randomness seed
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// set randomness seed
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uint32_t* seed = malloc(sizeof(uint32_t));
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uint64_t* seed = malloc(sizeof(uint64_t));
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*seed = 1000; // xorshift can't start with 0
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*seed = 1000; // xorshift can't start with 0
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int n = 1000 * 1000;
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int n = 1000 * 1000;
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34
squiggle.c
34
squiggle.c
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@ -14,14 +14,14 @@
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const float PI = 3.14159265358979323846; // M_PI in gcc gnu99
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const float PI = 3.14159265358979323846; // M_PI in gcc gnu99
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// Pseudo Random number generator
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// Pseudo Random number generator
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uint32_t xorshift32(uint32_t* seed)
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uint64_t xorshift32(uint32_t* seed)
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{
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{
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// Algorithm "xor" from p. 4 of Marsaglia, "Xorshift RNGs"
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// Algorithm "xor" from p. 4 of Marsaglia, "Xorshift RNGs"
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// See <https://stackoverflow.com/questions/53886131/how-does-xorshift32-works>
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// See <https://stackoverflow.com/questions/53886131/how-does-xorshift64-works>
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// https://en.wikipedia.org/wiki/Xorshift
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// https://en.wikipedia.org/wiki/Xorshift
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// Also some drama: <https://www.pcg-random.org/posts/on-vignas-pcg-critique.html>, <https://prng.di.unimi.it/>
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// Also some drama: <https://www.pcg-random.org/posts/on-vignas-pcg-critique.html>, <https://prng.di.unimi.it/>
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uint32_t x = *seed;
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uint64_t x = *seed;
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x ^= x << 13;
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x ^= x << 13;
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x ^= x >> 17;
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x ^= x >> 17;
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x ^= x << 5;
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x ^= x << 5;
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uint64_t xorshift64(uint64_t* seed)
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uint64_t xorshift64(uint64_t* seed)
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{
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{
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// Algorithm "xor" from p. 4 of Marsaglia, "Xorshift RNGs"
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// Algorithm "xor" from p. 4 of Marsaglia, "Xorshift RNGs"
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// See <https://stackoverflow.com/questions/53886131/how-does-xorshift32-works>
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// See <https://stackoverflow.com/questions/53886131/how-does-xorshift64-works>
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// https://en.wikipedia.org/wiki/Xorshift
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// https://en.wikipedia.org/wiki/Xorshift
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// Also some drama: <https://www.pcg-random.org/posts/on-vignas-pcg-critique.html>, <https://prng.di.unimi.it/>
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// Also some drama: <https://www.pcg-random.org/posts/on-vignas-pcg-critique.html>, <https://prng.di.unimi.it/>
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// Distribution & sampling functions
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// Distribution & sampling functions
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// Unit distributions
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// Unit distributions
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float sample_unit_uniform(uint32_t* seed)
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float sample_unit_uniform(uint64_t* seed)
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{
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{
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// samples uniform from [0,1] interval.
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// samples uniform from [0,1] interval.
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return ((float)xorshift32(seed)) / ((float)UINT32_MAX);
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return ((float)xorshift64(seed)) / ((float)UINT64_MAX);
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}
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}
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float sample_unit_normal(uint32_t* seed)
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float sample_unit_normal(uint64_t* seed)
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{
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{
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// See: <https://en.wikipedia.org/wiki/Box%E2%80%93Muller_transform>
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// See: <https://en.wikipedia.org/wiki/Box%E2%80%93Muller_transform>
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float u1 = sample_unit_uniform(seed);
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float u1 = sample_unit_uniform(seed);
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}
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}
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// Composite distributions
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// Composite distributions
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float sample_uniform(float start, float end, uint32_t* seed)
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float sample_uniform(float start, float end, uint64_t* seed)
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{
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{
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return sample_unit_uniform(seed) * (end - start) + start;
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return sample_unit_uniform(seed) * (end - start) + start;
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}
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}
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float sample_normal(float mean, float sigma, uint32_t* seed)
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float sample_normal(float mean, float sigma, uint64_t* seed)
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{
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{
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return (mean + sigma * sample_unit_normal(seed));
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return (mean + sigma * sample_unit_normal(seed));
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}
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}
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float sample_lognormal(float logmean, float logsigma, uint32_t* seed)
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float sample_lognormal(float logmean, float logsigma, uint64_t* seed)
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{
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{
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return expf(sample_normal(logmean, logsigma, seed));
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return expf(sample_normal(logmean, logsigma, seed));
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}
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}
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float sample_to(float low, float high, uint32_t* seed)
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float sample_to(float low, float high, uint64_t* seed)
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{
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{
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// Given a (positive) 90% confidence interval,
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// Given a (positive) 90% confidence interval,
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// returns a sample from a lognormal
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// returns a sample from a lognormal
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return sample_lognormal(logmean, logsigma, seed);
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return sample_lognormal(logmean, logsigma, seed);
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}
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}
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float sample_gamma(float alpha, uint32_t* seed)
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float sample_gamma(float alpha, uint64_t* seed)
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{
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{
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// A Simple Method for Generating Gamma Variables, Marsaglia and Wan Tsang, 2001
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// A Simple Method for Generating Gamma Variables, Marsaglia and Wan Tsang, 2001
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}
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}
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}
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}
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float sample_beta(float a, float b, uint32_t* seed)
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float sample_beta(float a, float b, uint64_t* seed)
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{
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{
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float gamma_a = sample_gamma(a, seed);
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float gamma_a = sample_gamma(a, seed);
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float gamma_b = sample_gamma(b, seed);
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float gamma_b = sample_gamma(b, seed);
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}
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}
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// Mixture function
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// Mixture function
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float sample_mixture(float (*samplers[])(uint32_t*), float* weights, int n_dists, uint32_t* seed)
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float sample_mixture(float (*samplers[])(uint64_t*), float* weights, int n_dists, uint64_t* seed)
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{
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{
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// You can see a simpler version of this function in the git history
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// You can see a simpler version of this function in the git history
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// or in C-02-better-algorithm-one-thread/
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// or in C-02-better-algorithm-one-thread/
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@ -364,13 +364,13 @@ struct box inverse_cdf_box(struct box cdf_box(float), float p)
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}
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}
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// Sampler based on inverse cdf and randomness function
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// Sampler based on inverse cdf and randomness function
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struct box sampler_cdf_box(struct box cdf(float), uint32_t* seed)
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struct box sampler_cdf_box(struct box cdf(float), uint64_t* seed)
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{
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{
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float p = sample_unit_uniform(seed);
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float p = sample_unit_uniform(seed);
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struct box result = inverse_cdf_box(cdf, p);
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struct box result = inverse_cdf_box(cdf, p);
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return result;
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return result;
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}
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}
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struct box sampler_cdf_float(float cdf(float), uint32_t* seed)
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struct box sampler_cdf_float(float cdf(float), uint64_t* seed)
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{
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{
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float p = sample_unit_uniform(seed);
|
float p = sample_unit_uniform(seed);
|
||||||
struct box result = inverse_cdf_float(cdf, p);
|
struct box result = inverse_cdf_float(cdf, p);
|
||||||
|
@ -378,7 +378,7 @@ struct box sampler_cdf_float(float cdf(float), uint32_t* seed)
|
||||||
}
|
}
|
||||||
|
|
||||||
/* Could also define other variations, e.g.,
|
/* Could also define other variations, e.g.,
|
||||||
float sampler_danger(struct box cdf(float), uint32_t* seed)
|
float sampler_danger(struct box cdf(float), uint64_t* seed)
|
||||||
{
|
{
|
||||||
float p = sample_unit_uniform(seed);
|
float p = sample_unit_uniform(seed);
|
||||||
struct box result = inverse_cdf_box(cdf, p);
|
struct box result = inverse_cdf_box(cdf, p);
|
||||||
|
|
26
squiggle.h
26
squiggle.h
|
@ -1,24 +1,24 @@
|
||||||
#ifndef SQUIGGLEC
|
#ifndef SQUIGGLEC
|
||||||
#define SQUIGGLEC
|
#define SQUIGGLEC
|
||||||
|
|
||||||
// uint32_t header
|
// uint64_t header
|
||||||
#include <stdint.h>
|
#include <stdint.h>
|
||||||
|
|
||||||
// Pseudo Random number generator
|
// Pseudo Random number generator
|
||||||
uint32_t xorshift32(uint32_t* seed);
|
uint64_t xorshift64(uint64_t* seed);
|
||||||
|
|
||||||
// Basic distribution sampling functions
|
// Basic distribution sampling functions
|
||||||
float sample_unit_uniform(uint32_t* seed);
|
float sample_unit_uniform(uint64_t* seed);
|
||||||
float sample_unit_normal(uint32_t* seed);
|
float sample_unit_normal(uint64_t* seed);
|
||||||
|
|
||||||
// Composite distribution sampling functions
|
// Composite distribution sampling functions
|
||||||
float sample_uniform(float start, float end, uint32_t* seed);
|
float sample_uniform(float start, float end, uint64_t* seed);
|
||||||
float sample_normal(float mean, float sigma, uint32_t* seed);
|
float sample_normal(float mean, float sigma, uint64_t* seed);
|
||||||
float sample_lognormal(float logmean, float logsigma, uint32_t* seed);
|
float sample_lognormal(float logmean, float logsigma, uint64_t* seed);
|
||||||
float sample_to(float low, float high, uint32_t* seed);
|
float sample_to(float low, float high, uint64_t* seed);
|
||||||
|
|
||||||
float sample_gamma(float alpha, uint32_t* seed);
|
float sample_gamma(float alpha, uint64_t* seed);
|
||||||
float sample_beta(float a, float b, uint32_t* seed);
|
float sample_beta(float a, float b, uint64_t* seed);
|
||||||
|
|
||||||
// Array helpers
|
// Array helpers
|
||||||
float array_sum(float* array, int length);
|
float array_sum(float* array, int length);
|
||||||
|
@ -27,7 +27,7 @@ float array_mean(float* array, int length);
|
||||||
float array_std(float* array, int length);
|
float array_std(float* array, int length);
|
||||||
|
|
||||||
// Mixture function
|
// Mixture function
|
||||||
float sample_mixture(float (*samplers[])(uint32_t*), float* weights, int n_dists, uint32_t* seed);
|
float sample_mixture(float (*samplers[])(uint64_t*), float* weights, int n_dists, uint64_t* seed);
|
||||||
|
|
||||||
// Box
|
// Box
|
||||||
struct box {
|
struct box {
|
||||||
|
@ -47,7 +47,7 @@ struct box inverse_cdf_float(float cdf(float), float p);
|
||||||
struct box inverse_cdf_box(struct box cdf_box(float), float p);
|
struct box inverse_cdf_box(struct box cdf_box(float), float p);
|
||||||
|
|
||||||
// Samplers from cdf
|
// Samplers from cdf
|
||||||
struct box sampler_cdf_float(float cdf(float), uint32_t* seed);
|
struct box sampler_cdf_float(float cdf(float), uint64_t* seed);
|
||||||
struct box sampler_cdf_box(struct box cdf(float), uint32_t* seed);
|
struct box sampler_cdf_box(struct box cdf(float), uint64_t* seed);
|
||||||
|
|
||||||
#endif
|
#endif
|
||||||
|
|
|
@ -4,9 +4,9 @@
|
||||||
#include <stdlib.h>
|
#include <stdlib.h>
|
||||||
#include <stdio.h>
|
#include <stdio.h>
|
||||||
|
|
||||||
#define N 10 * 1000 * 1000
|
#define N 1000 * 1000
|
||||||
|
|
||||||
void test_unit_uniform(uint32_t* seed){
|
void test_unit_uniform(uint64_t* seed){
|
||||||
float* unit_uniform_array = malloc(sizeof(float) * N);
|
float* unit_uniform_array = malloc(sizeof(float) * N);
|
||||||
|
|
||||||
for(int i=0; i<N; i++){
|
for(int i=0; i<N; i++){
|
||||||
|
@ -40,7 +40,7 @@ void test_unit_uniform(uint32_t* seed){
|
||||||
|
|
||||||
}
|
}
|
||||||
|
|
||||||
void test_uniform(float start, float end, uint32_t* seed){
|
void test_uniform(float start, float end, uint64_t* seed){
|
||||||
float* uniform_array = malloc(sizeof(float) * N);
|
float* uniform_array = malloc(sizeof(float) * N);
|
||||||
|
|
||||||
for(int i=0; i<N; i++){
|
for(int i=0; i<N; i++){
|
||||||
|
@ -76,7 +76,7 @@ void test_uniform(float start, float end, uint32_t* seed){
|
||||||
|
|
||||||
int main(){
|
int main(){
|
||||||
// set randomness seed
|
// set randomness seed
|
||||||
uint32_t* seed = malloc(sizeof(uint32_t));
|
uint64_t* seed = malloc(sizeof(uint64_t));
|
||||||
*seed = 1000; // xorshift can't start with a seed of 0
|
*seed = 1000; // xorshift can't start with a seed of 0
|
||||||
|
|
||||||
test_unit_uniform(seed);
|
test_unit_uniform(seed);
|
||||||
|
|
Loading…
Reference in New Issue
Block a user